Sphingomonas aliaeris: H5J25_07880
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Entry
H5J25_07880 CDS
T07559
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari00300
Lysine biosynthesis
sari01100
Metabolic pathways
sari01120
Microbial metabolism in diverse environments
sari01230
Biosynthesis of amino acids
Module
sari_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H5J25_07880 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sari01002
]
H5J25_07880 (dapE)
Enzymes [BR:
sari01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
H5J25_07880 (dapE)
Peptidases and inhibitors [BR:
sari01002
]
Metallo peptidases
Family M20
H5J25_07880 (dapE)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QQV78537
UniProt:
A0A974S5C0
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Position
complement(1676081..1677241)
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AA seq
386 aa
AA seq
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MGDRKVRDARRVTAVQPDVVELASALIACDSVTPATGAVFDVLEAALVPLGFHVDRFIMG
EAPDGPVENMLATRGTSGRHFAFAGHLDVVPPGSGWTSGAFVPEVRDGLLHGRGAVDMKG
AIAAFVAAIPPASDGMISLIITGDEEGPATYGTPVIIDRMAARGIRPDLCLVGEPTSAKH
LGDMIKIGRRGSVNIWIDVPGRQGHVAYPHLADNPIPRLVAALSEIDAIVLDEGNAWFQP
SNIEVTDITVGNPATNVIPAHASARLSIRFNDEHTGADLAARIEAVVHRHAPEAKVVARI
SGEAFLTPPGAFSAMIADAITARTGLIPDLSTTGGTSDARFLSALCPVVEFGLLNATMHK
LDEAVAVEDLRSLRDIYADILARALA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcgaaaagttcgagacgcccgtcgcgtgaccgcagtgcaaccggacgtcgta
gaactcgccagtgcgctgatcgcctgcgacagcgtgacgcccgccaccggcgcggtgttc
gatgtgctggaggcggcgctggtgccgcttggtttccacgtcgatcgcttcatcatgggg
gaagccccggacggcccggtcgagaacatgctggcgacccgcggtacgtcgggccggcac
ttcgcctttgccgggcatctcgacgtcgtgccgcccggttccggttggaccagcggcgcg
ttcgtgccggaggtgcgggacggcctgctccacggccggggcgcagtggacatgaagggc
gcgatcgccgccttcgtcgccgcaatcccgcctgcctccgatggcatgatcagcctgatc
atcaccggcgacgaggaaggccctgcaacctacggcaccccggtcatcatagaccgcatg
gcagcgcgcgggatcaggccggacctgtgccttgtcggcgaaccaacctcggccaaacat
ctgggtgatatgatcaagatcgggcggcgcggctcggtcaatatctggatcgacgttccc
ggtcgccagggtcatgtcgcctacccacaccttgccgacaacccgatcccgcgcctcgtc
gccgcactttccgagatcgatgcgatcgttctcgatgaagggaacgcctggttccagccg
tcgaacatcgaggtgacggatatcacggtcggcaatcccgcaaccaacgtcattcccgca
cacgcctccgcccggctcagcatccgcttcaacgacgaacatacgggcgcagacctcgcc
gcgcgcatcgaagcggtggttcaccgtcatgcgccggaggcgaaggtcgtggcgcgcata
tcgggcgaggcattcctgaccccgcccggcgcattctccgcgatgatcgccgatgcgatc
accgcccgcacggggctgataccagacttgtccaccaccggcggcacgtccgacgcgcgc
ttcctgtcggcgctgtgccccgtagtggagttcggcctgctcaacgccacgatgcataag
ctggacgaggccgtcgccgtcgaggacctgcgcagcctccgcgatatctacgccgacatc
ctggcgcgcgccctcgcctga
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