Sphingomonas aliaeris: H5J25_08260
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Entry
H5J25_08260 CDS
T07559
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sari03009
]
H5J25_08260
Enzymes [BR:
sari01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
H5J25_08260
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
H5J25_08260
Ribosome biogenesis [BR:
sari03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H5J25_08260
23S rRNA modification factors
H5J25_08260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_24
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QQV78593
UniProt:
A0A974NXF5
LinkDB
All DBs
Position
1756129..1756866
Genome browser
AA seq
245 aa
AA seq
DB search
MPKTRVDQLLVDRGLVESRTRAQALIMAGLVFAGTRKIEKPGQSIADDIALDVRGRDHPW
VSRGGIKLAHALDYFDWDVTDVVAIDVGSSTGGFTDVLLSRGASRVYAVDSGTNQLAWKL
RQDDRVVVHEQTSARILTASHIPDPVDLIVCDASFIGLAKVLETPISFVRPGGRMVALIK
PQFEAGREEVGRGGVVRDAAVHSRVCDEVSEWLKNKDWMVEGVVESPIKGPEGNIEFLIA
ATKPE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagacccgtgtcgatcaattgctcgtggatcgcggccttgtcgaaagccgcacc
cgtgcacaggctctcatcatggccggcctggtatttgccggcactcgcaagatcgaaaaa
cccggccagtcgatcgccgacgacatcgcgctcgacgttcgcggccgcgatcatccttgg
gtatcgcgcggcggaatcaagctcgcccacgcgctcgattatttcgactgggatgtaacg
gatgtcgtcgcgatcgacgtcggctcctcgactggcggctttacggacgtcctgctcagt
cgcggtgccagccgggtctatgccgtggatagcggcacgaaccagcttgcgtggaagctg
aggcaagacgaccgtgtagtcgtgcacgaacaaaccagcgctcgtatccttacagcttcg
cacattcccgatcccgtcgacctgatcgtttgcgatgctagctttatcgggttggcaaaa
gtgctcgaaaccccgatttcattcgtgcgccccggcggcaggatggtcgcgttgatcaaa
ccacagttcgaagcgggccgagaagaagtcggaaggggcggggtggtacgggacgcggcg
gttcattcacgcgtctgcgacgaagtttcggagtggctgaaaaataaggattggatggtc
gaaggcgtcgtcgaaagcccgataaaggggccggaagggaacatcgaattcctaatcgct
gcaaccaagcccgagtga
DBGET
integrated database retrieval system
