Sphingomonas aliaeris: H5J25_08995
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Entry
H5J25_08995 CDS
T07559
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H5J25_08995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_08995
Enzymes [BR:
sari01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H5J25_08995
DNA repair and recombination proteins [BR:
sari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H5J25_08995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QQV78706
UniProt:
A0A974NXH7
LinkDB
All DBs
Position
complement(1903957..1904703)
Genome browser
AA seq
248 aa
AA seq
DB search
MGADQNFDWKQAAASALEWWRDAGVDATIDETPRNWLVRPAPAPAIDPGVTIGEAVAASG
ALPDTLAAFEAWRVGADAPEAGWHGRPFMAAGNAAAEILVVIDMPEREDAESGQLLSGAA
GRLFDRMLAAIGRDRSSVYLVPLCAARPAAARIAPEIEARLSELLLHHVALAAPKRVLLM
GNAPSRAMLGLDFLRARGSLRPVNHEAGTIRGSFEAVATFHPRFLIEQPAKKAEAWKDLQ
MLIGGLQQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgaccaaaatttcgactggaaacaggccgccgcgagcgcgctggagtggtgg
cgcgacgctggcgtggatgcgacgatcgacgagacgccgcgcaattggctcgtccgtccc
gcacccgctccggcgatcgatcccggcgtaacgatcggcgaggccgtagcggcatcgggt
gccctgcccgatacgctcgcggcgttcgaggcgtggcgcgtcggggccgatgcgcccgag
gccggctggcatggccgaccgttcatggccgcgggaaatgccgccgcggaaattttggtc
gtcatcgacatgccggaacgcgaggatgcggaatcggggcaattgttgagcggggcggcg
ggtcgcctcttcgaccgaatgcttgccgcgatcgggcgggatcggtcctcggtgtacctc
gtgcccttatgcgcggcgcggccggccgctgcgcggatcgcgcccgaaatcgaggcgcgc
ttaagcgaattgctgttgcatcacgttgcgcttgccgcgccgaaacgggtgctgttgatg
ggcaacgcgccgagccgtgcgatgctcgggttggattttctgcgcgcccggggtagttta
cgcccggttaaccacgaagcgggcactatccggggcagtttcgaggcggtcgcgacgttc
catccgcgcttcctgatcgaacaaccggcaaagaaggccgaagcgtggaaagatttgcag
atgctgatcgggggattgcaacagtga
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