Sphingomonas aliaeris: H5J25_09025
Help
Entry
H5J25_09025 CDS
T07559
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sari03009
]
H5J25_09025
Enzymes [BR:
sari01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H5J25_09025
Ribosome biogenesis [BR:
sari03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H5J25_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
Motif
Other DBs
NCBI-ProteinID:
QQV78710
UniProt:
A0A974NXH9
LinkDB
All DBs
Position
1911332..1912516
Genome browser
AA seq
394 aa
AA seq
DB search
MTDTILRVAARGEGVTADGRHAPLAAPGDTLTAAFEVIPGPHHQTPPCRHFPTCGGCQLQ
HLDDQSYSAFIVDRIAGALAAHDLTAEIRTPKLSPPKTRRRAALQAEMKNGRVQIGFSEN
ASHTLVDIQECWILTPELFAVSAPLRTLLANFLKKNRRARLHLTQADQGIDLLVEGIEAE
GLDAAEAISAFCQKHGVARFAIDSGYGAEIRWEPEPVTISLSGVPVALPTASFLQATREG
EAALIEAVLEGVGGATTVADLFAGLGTFTFALSGKVYAGEAAREAILALKSAAARTGRTI
FADHRDLYRRALTTAELDRFEALVLDPPRAGAREQALLAAPSKVPVIVYVSCNPSSFARD
AQILCEGGFALEWIQPVGQFRWSTHVELAAKFSR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacgatcctccgcgtcgccgcgcgtggcgaaggcgtcaccgccgatggccga
cacgctcccctggccgcgcccggcgacacgctgaccgcggcattcgaggtcattcccggc
ccgcatcaccagacgccgccatgccgtcacttcccgacctgtggggggtgccagctccag
catctcgatgaccaaagctattccgccttcatcgtcgatcgcatcgcaggcgcgctcgcg
gcgcatgacctgaccgctgagatccgcacgccgaagctgtcgcccccgaagacgcgccga
cgtgccgcgttgcaggcggaaatgaagaacggccgcgtccagatagggttcagcgagaat
gccagccatacgctggtggacattcaggaatgctggatcctcacgccggaattgtttgcg
gtgagcgcaccattgaggacattgctcgcaaattttctcaagaagaaccgccgcgcgcgc
ttgcatctgacccaggcggatcagggcatcgacctgctggtcgaagggatcgaggccgaa
gggctcgacgccgccgaggcgatcagcgcattctgccagaaacatggcgtggcgcgcttt
gcgatcgacagcggctatggtgccgaaatccgctgggagcccgaacccgtcaccatttca
ctgagcggcgtacccgtcgctctgccgaccgcatcgttcctgcaggcgacccgcgaaggc
gaagcggccttgatcgaggctgtgctggagggcgtagggggcgccacgaccgtcgccgat
ctgttcgccggtctcggcacgttcaccttcgcgctgtcggggaaggtctatgccggcgag
gccgcgcgcgaggcgatcctggcgctgaagtcggctgcggcgcggacaggtcgcacgatc
ttcgccgatcaccgcgacctttatcggcgcgccctgacaaccgccgaactggatcgcttc
gaggcgctggtgctcgatccgccccgcgccggcgcgcgcgaacaggcgttgctcgcagca
ccgtcgaaggtgccagtcatcgtctatgtatcctgcaatcccagcagcttcgcccgcgat
gcccaaattttgtgcgaaggtggctttgcgctggaatggatccagccggtcggccagttc
cgctggtcaacgcacgttgaactcgctgcaaaattttcccggtga
DBGET
integrated database retrieval system
