Sphingomonas aliaeris: H5J25_09880
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Entry
H5J25_09880 CDS
T07559
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_09880
Enzymes [BR:
sari01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H5J25_09880
DNA repair and recombination proteins [BR:
sari03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H5J25_09880
Prokaryotic type
H5J25_09880
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
QQV75913
UniProt:
A0A974S2U1
LinkDB
All DBs
Position
complement(2089202..2090584)
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AA seq
460 aa
AA seq
DB search
MNLKAEPTLLWLRRDLRVADQAALIAAVHDGPVIPVYILDDETPKHRRMGGASRWWLHHS
LMSLDKDLRKLGSRLILRRGRADTVLTDLAAETGAKRVHCLHHYEPWWRNAEHAVAKTLD
LVCHDGNYLAPPGTVTTGSGAPYKIYTPFWRALSAHMPPPHPVAAPDAIPAPAKWPASDT
LADWNLLPTKPDWATGFVKEWTPGEGGAKERLEDFLPHASGYDIGRNLPSDELTSRLSPH
LHFGEISPATVWHHVIEAKGDATIYLKEIAWRDYAQNVILQYPDYGRESGRPTLDALEWR
TGPDAASDLKAWQQGRTGYPIVDAGMRQLWTTGWMHNRVRMITASFLIKHLLIDWRKGEE
WFWDCLVDADYASNSVNWQWTSGTGIDPNMFVRIMAPLTQSVKFDAAGYIREWVPELSGL
DDAAIHDPDESGRRPESYPAKIIGHREGRERALAAARRTK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaaggccgaaccgaccctcttgtggctccgtcgcgatctgcgcgtggccgat
caggctgccttgatcgccgccgtccatgacggtccagtcatccccgtctacatcctcgat
gacgaaacgccgaagcatcgccgaatgggtggcgcgtcacgctggtggctgcatcacagc
ctgatgtccctcgacaaggatctccgcaaactcgggtcgcggctgatcctcaggcggggc
agggcggatacggtcctgaccgatctcgccgccgaaacaggggcgaagcgtgtgcattgc
ttgcatcactacgaaccctggtggcgcaatgccgagcacgcggtggcgaaaacgctcgat
ctggtctgtcatgacggcaactacctcgcaccccctggtacggtgacgacgggctccggc
gcgccctacaagatctacacccccttctggcgagcgctctccgcccacatgccgccgccg
catcccgtcgccgcgccggatgcgatcccggccccggcaaaatggcccgcaagcgatacg
ctcgcggactggaacctcctcccgacgaaacccgactgggcgacgggcttcgtcaaggaa
tggacgccgggcgagggcggtgcgaaggagcggctcgaagattttctcccccacgcctcc
ggctacgacatcggccggaatcttccatccgacgaattgacgtcgcgcctctcaccccat
ctgcatttcggcgaaatttcgcccgcaaccgtctggcaccacgtcatcgaggcgaagggc
gacgcgacgatctacctgaaggaaattgcctggcgcgattatgcccagaacgtcatcctg
caatatcccgattatggccgcgaaagcggccgccccacgctggacgcgctggaatggcgc
accggtccggacgcagcctccgatttgaaggcatggcaacaggggcgcaccggctatccg
atcgttgatgccgggatgcgtcagctctggaccacaggctggatgcacaaccgcgtccga
atgatcactgcctccttcctgatcaagcacctcctcatcgactggcggaagggcgaggaa
tggttctgggactgcctggtcgatgccgactacgcgtcgaacagcgtgaactggcaatgg
acgtcgggcacggggatcgatccgaacatgttcgtccgcatcatggccccgctcacccag
tcggtgaagttcgacgccgccggctacattcgcgaatgggtgcccgaactctccggcctc
gatgacgccgccattcatgatcccgacgaatccggacgccgtccggagagctaccccgct
aagattatcggccaccgcgaaggtcgtgaacgcgcgctggccgcggcacggcggacgaaa
tga
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