KEGG   Sphingomonas aliaeris: H5J25_11010
Entry
H5J25_11010       CDS       T07559                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
sari  Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:sari00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sari03016]
    H5J25_11010
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sari02048]
    H5J25_11010
Transfer RNA biogenesis [BR:sari03016]
 Prokaryotic type
  tRNA degradation factors
   H5J25_11010
Prokaryotic defense system [BR:sari02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    H5J25_11010
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: QQV76081
UniProt: A0A974NSH9
LinkDB
Position
complement(2359664..2360047)
AA seq 127 aa
MDKPRFLIDSNIAIYVLRDSASRPAVRIGELLPGTVVTSAIVYAEILLGIPPEEKDARIS
VERLFERVPVLPFDAGAAQAYARIPFKRARFDRLIAAHALSLGLTLVTNNENDFRDIPDL
AVENWTQ
NT seq 384 nt   +upstreamnt  +downstreamnt
gtggataagccgcgatttttgatcgattcaaacatcgctatctatgtcctacgcgatagc
gcatcgcggcctgcagttcgcatcggtgaacttctgccgggaacggttgtcacgtccgca
atagtctatgccgagattttgttgggtatcccgccagaggagaaggatgcgaggatttcg
gtcgagcggctgttcgaacgggttccggtgttgccgttcgatgcgggcgcggcgcaggcc
tatgcccgtattccgttcaagcgcgcgagatttgatcgcctgattgcggcacacgcgctt
tcgttggggcttacccttgtgaccaacaacgaaaatgacttccgcgatattcccgatcta
gccgtcgagaactggacgcaatga

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