Sphingomonas aliaeris: H5J25_11060
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Entry
H5J25_11060 CDS
T07559
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sari03000
]
H5J25_11060 (pspF)
Transcription factors [BR:
sari03000
]
Prokaryotic type
Other transcription factors
Others
H5J25_11060 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA_16
HTH_23
HTH_28
AAA_22
AAA_2
AAA
Motif
Other DBs
NCBI-ProteinID:
QQV76090
UniProt:
A0A974S3I8
LinkDB
All DBs
Position
complement(2368586..2369617)
Genome browser
AA seq
343 aa
AA seq
DB search
MDRATQVIGQSNAFLDVLERASRAAALDRPVLVIGERGTGKELVAERLHRLSPRWDQPLV
VMNCAALPETLIEAELFGHEAGAFTGATKARVGRFEEADGGTLFLDELGTLSMGAQERLL
RAVEYGEITRIGSSRPLRVDVRIVAATNEHLPAKVECHQFRADLLDRLSFEVVTLPPLRA
RPGDVMVLADHFGRRMAAELGRDSWAGFGRDATDALVDYQWPGNVRELRNVVERAVYRWE
QSGPIEHIEFDPFHSPYQPVGVAATSMSPPVSSPTTTAPEPDCSGDFKTRIARFERELLE
KALADSRFNQRATAEALGLSYDQLRHALKRHGLISAGPSESVA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgcgacgcaggtcattgggcaatcgaacgcctttctcgacgtgctcgaacgg
gccagtcgtgcagctgcgctggatcgaccggtgctcgtgataggcgagcgcggcacgggc
aaggaactggtcgccgagcgcctgcatcgcctttctccccgctgggaccagccgctcgtc
gtgatgaactgcgcggccttgcccgagacgctgatcgaggcggagctgttcgggcacgag
gccggcgcgttcaccggggcgaccaaggcgcgcgtcggccggttcgaggaagcggacggg
ggcacgctgttcctcgacgagttgggcacgctgtcgatgggggcgcaggagcggttgctg
cgtgcggtcgaatatggcgagatcacccggatcggatcgtcgcgcccgctgcgcgtcgac
gtacgcatcgtcgcggcgacgaacgagcatcttcccgcgaaggtcgaatgccaccagttc
cgcgccgatctgctcgatcgccttagtttcgaggtcgtgacattgccgccgctgcgcgcc
cgtccgggggacgtcatggtacttgcggatcatttcgggcggcgcatggcggcggagctg
gggcgcgatagttgggcggggttcggacgcgatgcgaccgacgcgctcgtcgattatcaa
tggccgggcaacgtccgcgaattgcgcaacgtggtcgagcgtgcggtctatcgctgggaa
cagagcgggccgatcgagcatatcgagttcgatccgtttcattcgccatatcagccggtc
ggcgtcgccgcgacgagcatgtccccaccggtgtcgtcgccgacgacaaccgcgcccgaa
ccggactgcagcggggacttcaaaacccggatagcgcggttcgagcgggagttgctggaa
aaggcgctggccgacagccgcttcaatcagcgtgcgacggccgaggcgttggggttgagt
tacgatcagttgcggcacgcattgaagcggcacgggctaatttccgcgggtccatccgaa
tcggttgcgtaa
DBGET
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