Sphingomonas aliaeris: H5J25_11170
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Entry
H5J25_11170 CDS
T07559
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sari03021
]
H5J25_11170 (rpoH)
Transcription machinery [BR:
sari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H5J25_11170 (rpoH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QQV76106
UniProt:
A0A974S366
LinkDB
All DBs
Position
2384097..2384999
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AA seq
300 aa
AA seq
DB search
MAKSNVPATVPALGGEASLNRYLSEIKKFPILAPEQEYMLAKRFEEHGDTDAAAQLVTSH
LRLVAKIAMGYRGYGLPTSELISEGNIGLMQGVKKFEADRGFRLATYAMWWIRASIQEYI
LRSWSLVKMGTTAAQKKLFFNLRRMKSKLDAFEDGDLSPEHLTKIATDLGVTEAEVTSMN
RRMAMGGDTSLNVPMREDGDGQWQDWLQDDAPLQDTVVAEAQEADVRHEMLTSAMDDLNE
REQHILTERRLTDDPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRLAGDRRLLAAV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagcaacgtgccagccacggtccccgctcttggcggggaggcaagcctcaac
cgctatctgtcggaaatcaagaaattccccatcctcgcgcccgagcaggaatatatgctc
gcgaagcgcttcgaggaacatggcgacaccgacgccgcagcgcagctggtgacctcgcac
cttcgcctcgtggcgaagatcgcgatgggctatcgcggctacggcctgcccacgtcggaa
ctgatttccgaaggtaatatcggcctcatgcagggcgtgaagaagttcgaggccgatcgc
ggcttccggctcgcgacctatgcgatgtggtggatccgcgcctcgatccaggaatatatc
ctgcgctcgtggagcctcgtgaagatgggcacgaccgccgcgcagaagaagctgttcttc
aacctgcgccggatgaagtccaagctcgacgcgttcgaggatggcgatctgtcacccgag
catctgaccaagatcgccaccgatctcggcgtgaccgaggcggaagtgactagcatgaac
cgtcgcatggcgatgggcggggacacctcgctcaacgtgccgatgcgcgaggatggcgac
ggccagtggcaggattggctgcaggacgacgcaccgttgcaggacaccgtggtcgcggag
gcgcaggaagccgacgttcgccacgaaatgctgaccagcgcgatggacgatttgaacgag
cgcgagcagcacatcctgaccgagcggcgcctgaccgacgatcccaagacgctcgaggaa
ctgtcgcaagtctacggcgtcagccgcgagcgtgtccgccagatcgaggtacgggcgttc
gaaaagctgcaaaaggcgatgatgcgcctggctggcgaccgacggcttctcgccgcggtt
tga
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