Sphingomonas aliaeris: H5J25_13455
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Entry
H5J25_13455 CDS
T07559
Name
(GenBank) autotransporter-associated beta strand repeat-containing protein
Organism
sari
Sphingomonas aliaeris
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
QQV76464
UniProt:
A0A974S3I5
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All DBs
Position
2876827..2882868
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AA seq
2013 aa
AA seq
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MQITSLSAGARHSNAVRRILLLTTALGSTLGATAPAMAENIAYSGTGPYVLTQTDPVSGG
PRTIDVTVSSGDIAIDTATVNVENNATNPAPSGTPLGVGIWANNTGTGNTTVNSGTVTAT
GTGQTAGIDARVTSGELSITSGTITSTATNSTAMNAISSAGGNVTVNADQTIGARRGIFT
SGAGATVINSKFATASGLVSPNAIIGQGATVEVDSQLATLTGNGNQGAAIFVQSALGNAT
IRSGTASTQGYGQVGIALQYANTNGLVTSELVSTSGDYARGIYGSAVGVTAIRSTTINTS
GDAATGIFVSPNANISNDIPTTGSVDVVSGTITTTGEEADAILVTPTTPTRGRNGTMISG
AIAVDSDSITTSRAFSRGIAVNGTSGSIDITSRAITTHGEYSTAIDITGVVAETGNPTQI
SNTGPIVTTGNYATAIKVYPGTGAVTIANSGSITTGGIGAYGITANITSGSMTLTGAGPV
TTTGDFSHGIYLAPGAGTYSGATSLTSGPIATSGRGASGIFILNTAGPVTINASDIRATG
ADASAIVVVPVSGATAPINVQAGIVRTTGSGAHAAINLSSNGLTGPITVNVADTISTGAA
VDARSVGAVSVTSGIARVTGGASTGLVAISSGDTATLVSTDLAVTNNRGIFVQGRDNASV
TSGILSVTGNNQAIFAQTSSGSGAGAAPGTVAVKSTTLTSEAGGINAFGPRATINVDSGS
VVAGNAVAIAAYGIGVTVTSETIATGHVGIDAGYASGSSSTAPTVINSGSITLNGAAAAT
GGGIQANGAGVIVNSGTILATGLGNRFGINAQVFSSDEAGITQPGTVAITSGSITTVGNG
AYGIQASSDAGAITIDSTGAISTSGTTRLAGTQPRYSAGIVATSQSGAITIASNDITTSG
AQSDGVHVEAGNAISSSFRGPNVAAAAISITTSGTTQTSGSRAAGVRVRAGGGVVAIVNS
GTIATTGEGSQGIDVQSGGDLSIDSLTATATQGNGIFASVDGLVDIRSGTASAGGIANSA
IYAVGGTGVTLVSGSASSTAATITDEEFTQYGHAIYLEAVTGAVTATIGNASATGEGADA
VHIIANGSGGAATVSITGAVSSASGIGLFIDPPGAVNISVASGASITGALSGIDTIGGSN
TIVNEGTISSTGGAAIVAAGATALTNSGAIVGTGDVAVRFGATDDSVTLRTGSRVTGVIA
GGGGTDAAFLSGTTTTASPTQSIAAFTGFDSLTVQNGYWTADANGPSAFNTVTVDTGSAL
ELANGATGIVGISAPAIVANGTVVVRSDAVASGSTLGNMTIGGSGSVLLTGPGTVTLDGT
DAITTSNGSTVDSGRLLLTGTQGGAVTTNAGGTLQLGNGGTTGTFTGSLVNNGTLNVNRS
DDYMFGGALTGTGSIVKDGAGKLTFGTGYAFTGTTTVNGGSIRLTTAVVPTTELTVEGNG
QIDLSGLPQTVAELAGTSTTASVNIDNGSLAVNQATNTSFSGALVGNGTLTKTGSGSLNL
TGTSTYTGGTAVDEGRLAVNGSIVSPLVVNSGGTLGGTGTTGNVTIGAGGTYAPGNSIGT
QTVVGNVVFATGSIFGVEANAAGAADRVNASGTVTINGGTVAVTAAPGNYANLTDYTVLT
GAGGVTGRFTGVTSNLAFLSPSLNYSTTAVTLTLARNDISFATLGNTGNQVAVANAVQAL
GIGNAIYTVALLQTTGSAAATFDRLSGEIHASTSALLIDGGRRMVDAVLSRGRENGGEGF
GLWAQGIQSYTDSERRTGLANVSGNQTGMIGGLDYAGGNWRVGLNGGYADNRIQASALGS
RAHAKTKSVGGSLAWQDDRIVVQAGIGYAWHDLSSTRTPGVTGIAASLASKSEATSLQLF
GEASYRVVDGNITVAPYLRNEFTSLRSKAFVETGGTGALSVGRDTRDADFTSLGLRIGGT
APVSETVSLLPHMSVAYRRGWGKLGGDTRTAAFVGAAGKFNVAGTPLGRNSADLEGGADL
AFGQRITVGVNGFGSISKEIGSYGVRAAVSIRF
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacatcactgagcgcaggcgcgcggcattccaacgccgttcgtcggatcctt
ctgctgacgactgcgctcggaagcacgctcggtgccacggcaccggccatggccgaaaac
atcgcctattccggcaccggcccgtatgtcctgacgcagaccgatccggtttccggtggt
ccacgcaccatcgatgtcacggtttccagcggtgacatcgcaatcgacactgcgaccgta
aacgttgaaaataatgccaccaacccggcaccctccggcacgccgctcggcgtgggcata
tgggccaacaataccggcaccgggaacacgaccgtgaatagcggaaccgttaccgcgacg
ggcactggccagacggccggcatcgatgcacgcgtgacgagtggcgaactctcgatcacc
agcggaacgatcaccagcaccgccaccaacagcactgcaatgaacgcgatcagcagcgcc
ggaggcaacgttacggtcaacgccgaccagacgatcggcgcgcgacgcggcattttcacg
tccggagctggcgccacggtcatcaacagcaaattcgcgaccgccagcggcctcgtgtcg
cccaacgcgatcatcgggcaaggtgccaccgtcgaggtcgacagccagcttgcgacgctg
acgggtaacggcaatcagggcgcggcaatcttcgttcaatccgccctcgggaatgcgacc
atccgttccggaaccgcctccacgcaaggatatgggcaggttggcattgcgctgcaatat
gccaataccaatggcttggtgacgagcgaactggtcagcacgtccggcgattacgcgcgg
ggaatctatggtagcgccgttggggttaccgccattcgcagcactacgatcaacacgtcc
ggcgacgccgccacgggtatcttcgtcagcccgaacgccaatatctccaatgacattccg
actaccggatcggtcgacgtggtcagcggcacgatcacgacgacgggggaggaggcggac
gcgattttagtaacgccgacaaccccgacccgcggccggaacggaaccatgatttccggc
gcgatcgcagtggacagcgactctatcaccacttcccgagcgttttcgcgcggcatcgca
gtgaatggcacgtccggatcgatcgatatcaccagccgcgcgatcacgacgcacggcgaa
tattcaaccgcgatcgacatcacgggtgttgtggccgaaacgggcaatccaacgcagatc
agcaatacgggcccgatcgtcacgaccggcaactacgccaccgcgatcaaggtctatccc
ggtaccggagcggtaacgatcgccaatagcggatcgattaccacaggcggtatcggcgcg
tacggcattaccgcaaacatcaccagcgggtcgatgacgctgaccggcgccggtccagtg
acaaccaccggcgatttctcgcacggcatatatctggcaccgggtgctggtacatattcc
ggggcaacctcgcttacatcgggcccgatcgccaccagcggcagaggcgcatccggcatc
ttcattctgaataccgctgggccggtaacgatcaacgcgagcgacattcgcgcgaccggc
gcggatgcgtccgcgatcgtcgtcgtcccggtatcgggcgccaccgcacctatcaacgtg
caggctggcatcgtccgcaccacgggcagcggcgcacatgcggcgatcaacctcagcagc
aatggcctgaccgggccgatcaccgtcaacgtcgcggatacgatctccacgggcgcggcg
gtcgacgcccgttccgtcggggcggtgtccgtgaccagcggcatcgcacgggtaaccggc
ggggcttcgaccggtctcgtggcaatctcgtcgggcgatacggcaacgctcgtctcgacc
gatcttgccgtcaccaacaatcgcggcattttcgtccagggccgtgataatgccagtgtc
accagcggtattctttccgtcaccggcaacaaccaagcgatctttgcacagacgagttcc
ggatccggggcaggtgcggccccgggcacggtcgcggtcaaaagcacgacgctgaccagc
gaagcgggcggcatcaatgcgttcggcccccgcgcgacgatcaatgtcgacagcggatcg
gtcgtcgcaggcaacgccgtcgcgatcgccgcatacggcatcggcgtcaccgtcaccagc
gagacgatcgccaccggccatgtcggcatcgatgcagggtatgccagcggatcttcctcc
accgcgccgaccgtcatcaacagcgggtcgatcacgctgaacggcgcggccgcggctacg
ggtggcggaatccaggccaacggcgctggcgtcatcgtcaatagcggaacgatcctcgcc
accggcctcggcaatcgcttcggcatcaacgcgcaggtcttcagcagcgatgaagccggc
attacccagccgggcaccgtcgcgatcacgtccggatcgatcaccaccgtcggcaacggt
gcctatggcatccaggcgtcgagcgatgcgggcgcgatcacgatcgacagcaccggcgcg
atctcgaccagcggcaccacgcgtctcgcggggacccagccgcgttactccgccggcatc
gtcgcgacgagtcagtcgggtgcgatcaccatcgccagtaacgacatcaccacatcgggc
gcgcaatcggacggcgttcacgtggaagctggcaacgcgatctcatcgtctttccgcggc
cccaatgtcgccgccgccgcaatttccatcacgacctccggcacgacgcagaccagcggc
agccgcgccgccggcgtccgggttcgcgctggtggtggcgtcgtggcgatcgtcaacagc
ggcacgatcgcgacgacgggcgaaggctcacaaggtatcgacgtgcaatcgggcggcgac
ctgtcgatcgacagccttacggcgactgccactcagggcaatggcatcttcgcgtctgtc
gacggactggtcgatatccgcagcggcactgcgagtgcgggtggaattgccaactcggcg
atttatgccgtcggcggcaccggcgtgacactcgtcagcggttccgcctcgtcgactgcc
gcaaccatcaccgacgaggagtttacgcaatacggccatgctatctatctcgaggccgta
accggcgcggtaaccgcgaccatcggtaacgccagcgcgacaggcgaaggcgcggatgcc
gtccatatcatcgccaatggctcggggggcgctgcaaccgtttcgatcaccggcgcggta
tcatcggcaagcggcatcggtctgttcatcgatccaccgggcgcggtaaacatctctgtc
gcgtcgggcgccagcatcacgggcgcgctttccggcatcgatacgatcggcggcagcaac
acgatcgtcaacgaaggcacgatcagcagcaccggcggtgcggcgatcgtcgcggctggt
gcgaccgcgctgaccaacagcggtgcgatcgtggggaccggcgatgtcgccgttcgtttc
ggtgcgaccgatgacagcgtcacgctgcggaccggatcgcgcgtcaccggcgttattgcc
ggcggtggcggcaccgatgccgccttcctcagcggaacgacgacgaccgcgtcccccacg
cagtcgatcgccgctttcaccggcttcgatagcctgaccgttcagaacggctactggacc
gccgacgccaatggccccagcgccttcaataccgttaccgtcgacaccggcagcgcgctg
gagcttgcaaacggtgcaaccgggatcgtcggaatctctgcccccgcgatcgtcgccaat
ggtaccgtcgtcgtgcgcagtgatgcggtcgccagcggcagcacactgggcaacatgacg
atcggcggttcgggcagcgtcctcctgaccggccccggtaccgtcacgctggacggtacg
gacgccatcaccaccagcaacggcagcaccgtcgatagcgggcgcctgctgctgaccggt
acgcagggcggagcggttacgaccaatgcgggcgggaccttacagctcggcaacggcggc
acgaccggcacctttacgggctcgctcgtcaataacggaacgctcaacgtaaaccgttcg
gacgactatatgttcggcggcgcactgaccggcacgggatcgatcgtgaaggacggcgcc
gggaagctcaccttcggcacgggctatgccttcaccggcacgacgaccgtcaatggcggg
tcgatccgcctgacgacggcggtcgtcccgacaaccgagctgaccgtcgaaggcaacggg
cagatcgatctgtccggcctgccgcagacggtggccgaactcgccggaacgagcaccacg
gcaagcgtcaacatcgacaatggttcgctcgccgtgaaccaggccaccaacacgtccttc
tcgggcgctttggtcggcaacggcacgctgaccaagacgggatcgggctcgctcaaccta
accggtaccagcacctataccggcgggacggcggtggacgaaggtcgccttgcggtgaac
ggcagcatcgtctcgccgcttgtcgtgaactcgggcggcacgctgggcggaacaggcacg
accggcaacgttacgatcggcgccggcggcacctatgctcccggtaactcgatcggaacg
cagacggtcgtcggcaacgtcgtcttcgcaacggggtcgatcttcggcgtcgaggcaaac
gccgcgggcgcggcggatcgcgtgaacgcttccggtaccgtcacgatcaacggcggcacg
gtcgcggtaacggcagcaccgggcaattatgccaatttgaccgactacaccgtgctcacc
ggcgcaggtggcgtgacgggccgcttcacgggcgtaacgtccaacctcgccttcctttcg
ccatcgctcaactacagcaccaccgcggtgacgctgacgctcgctcgcaacgacatatcg
ttcgcgacattgggcaatacgggcaaccaggtcgccgtcgccaatgcggtacaggcgctg
ggcatcggcaacgcgatctacaccgtcgccttgctgcaaacgacgggcagtgcagccgcc
accttcgatcgactgtcgggggaaatccatgcgagcacctctgcgttgctcatcgacggg
gggcgccgcatggtcgatgccgtcctgtcgcgtggtcgtgagaacggcggcgaaggcttc
ggtctgtgggcacaaggtattcagtcctataccgacagcgaacgtcggaccggcctcgcc
aatgtttccggaaaccagaccggcatgatcggcggactggactatgccggcgggaattgg
cgtgtggggctgaacggcggttatgccgacaaccggatccaggcctccgcccttggaagc
cgcgcgcatgcgaagaccaagtcggttggcggtagcctcgcctggcaggacgaccggatc
gtcgtacaggccgggatcggctatgcatggcacgatctcagcagcacgcgcacgccaggc
gttaccggtatcgcggccagcctcgcgagcaagagcgaagccaccagcctgcaactgttc
ggggaagcatcgtaccgcgtcgtcgatggcaacatcaccgtcgcgccgtaccttcgcaac
gagttcaccagcttgcgcagcaaggcgttcgtggaaacgggcggtacgggcgcactgtcg
gtcggacgcgacacgcgcgatgccgacttcacgagcctgggcctccgcatcggcggcacg
gcgcccgtttcagaaaccgtctcgctcctgccgcatatgtcggtcgcgtatcgccgcggc
tggggcaaactcggcggagacacgcgcacggcagcgttcgtgggcgcggcgggcaagttc
aacgtcgccggcacgccactcggccgcaacagcgccgacctggaaggcggcgccgacctg
gctttcggccagcgtatcacggtcggcgtcaacgggttcggatcgatttcgaaggaaatc
ggcagctacggcgtccgcgctgccgtcagcatccgcttttga
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