Sphingomonas aliaeris: H5J25_15985
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Entry
H5J25_15985 CDS
T07559
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H5J25_15985 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sari03019
]
H5J25_15985 (groL)
03110 Chaperones and folding catalysts [BR:
sari03110
]
H5J25_15985 (groL)
03029 Mitochondrial biogenesis [BR:
sari03029
]
H5J25_15985 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sari04147
]
H5J25_15985 (groL)
Enzymes [BR:
sari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
H5J25_15985 (groL)
Messenger RNA biogenesis [BR:
sari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H5J25_15985 (groL)
Chaperones and folding catalysts [BR:
sari03110
]
Heat shock proteins
HSP60 / Chaperonin
H5J25_15985 (groL)
Mitochondrial biogenesis [BR:
sari03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
H5J25_15985 (groL)
Exosome [BR:
sari04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H5J25_15985 (groL)
Exosomal proteins of other body fluids (saliva and urine)
H5J25_15985 (groL)
Exosomal proteins of breast cancer cells
H5J25_15985 (groL)
Exosomal proteins of colorectal cancer cells
H5J25_15985 (groL)
Exosomal proteins of bladder cancer cells
H5J25_15985 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QQV76873
UniProt:
A0A974S3S8
LinkDB
All DBs
Position
complement(3392425..3394071)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSYGAPRITKDGVTVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVTKVVEDVKSRSKPVSGTSEIAQVGIISANGDKEVGEKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPEKMTVELNDPYILIHEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGEM
ISEDLGIKLESVTIGMLGTAKRVTIDKDNTTIIDGAGEADAIKGRTDAIRQQIENTTSDY
DKEKLQERLAKLAGGVAVIKVGGASEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALEGMTGVNEDQTRGIDIVRKSLTALVRQIAANAGHDGAVVSGKLLDQSNTSFGFN
ASTDVYEDLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAVSELPEDKPAMPMGGGGGM
GGMGGMDF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagacgtaaaattttcgcgtgacgcacgcgagcgcatcctgcgcggcgtg
gatatccttgccgacgccgtgaaggtcaccttggggccgaagggccgcaacgtcgtgatc
gacaagagctatggcgcaccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcgcagatggtgcgcgaagtcgcctcgaag
accaacgacatcgccggtgacggcacgaccaccgcgaccgttctggcgcaggcgatcgtc
cgtgaaggcatgaagtcggttgcagcgggcatgaacccgatggacctgaagcgcggtatc
gatctcgccgtcaccaaggtcgtcgaggacgtgaagtcgcgttcgaagccggtttccggc
acgtccgaaatcgcacaggtcggcatcatctcggccaatggcgacaaggaagtcggtgag
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtcatcaccgtcgaagaggcc
aagggtctcgatttcgaactggacgtcgtcgaaggcatgcagttcgaccgcggttacctg
tcgccatacttcatcacgaacccggaaaagatgacggtcgaactgaacgacccgtacatc
ctgatccacgagaagaagctgtcgaacctgcaggcgatgctcccgatcctggaagccgtc
gtccagtcgggccgtccgctgctgatcattgcggaggatatcgagggtgaggcgctcgcc
acgctcgtcgtcaacaagctgcgcggtggcctgaaggtcgcagcggtcaaggcaccgggc
ttcggcgatcgtcgcaaggcgatgctggaagacatcgcgatcctgaccaagggcgagatg
atctcggaagacctcggcatcaagctggaaagcgtcacgatcggcatgctcggcaccgcc
aagcgcgtcacgatcgacaaggacaacaccaccatcatcgacggtgctggtgaagccgac
gcgatcaagggccgtaccgatgcgatccgccagcagatcgagaacaccaccagcgattac
gacaaggaaaagctccaggagcgtcttgccaagctcgccggcggcgttgccgtgatcaag
gtcggtggtgcttcggaagtcgaagtgaaggagcgcaaggaccgcgtcgacgacgcactg
cacgcaacccgcgcagccgtcgaagaaggcatcgtccccggtggtggtacggctctgctg
tacgcgaccaaggcgctcgaaggcatgaccggcgtcaacgaagaccagacgcgcggcatc
gacatcgtccgcaagtcgctgaccgctctggtgcgccagatcgcggcgaatgccggccat
gacggcgcggtcgtctcgggcaagctgctcgaccagtcgaacacctcgttcggcttcaac
gcgtcgactgacgtgtatgaggatctggtcgcagccggcgtgatcgacccgaccaaggtc
gtccgcaccgcgctccagaacgcggcatcggtcgccggcctgctcatcacgacggaagcc
gccgtgtccgaactgccggaagacaagcccgcaatgccaatgggcggcggcggcggcatg
ggcggcatgggcggcatggacttctga
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