Sphingomonas aliaeris: H5J25_16475
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Entry
H5J25_16475 CDS
T07559
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sari03019
]
H5J25_16475 (rnc)
03009 Ribosome biogenesis [BR:
sari03009
]
H5J25_16475 (rnc)
03036 Chromosome and associated proteins [BR:
sari03036
]
H5J25_16475 (rnc)
Enzymes [BR:
sari01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
H5J25_16475 (rnc)
Messenger RNA biogenesis [BR:
sari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H5J25_16475 (rnc)
Ribosome biogenesis [BR:
sari03009
]
Eukaryotic type
90S particles
RNase
H5J25_16475 (rnc)
Prokaryotic type
rRNA processing factors
H5J25_16475 (rnc)
Chromosome and associated proteins [BR:
sari03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
H5J25_16475 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
GATA-N
Motif
Other DBs
NCBI-ProteinID:
QQV79125
UniProt:
A0A974NY70
LinkDB
All DBs
Position
3487350..3488021
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AA seq
223 aa
AA seq
DB search
MGGEPVADWIERALGHRPADLAPFDRALTHGSQAAANYERLEFLGDRVLGLVMAEWLFAL
FPNEPEGALSKRLNALVTGAVCADVARGLGVAQHLKLGKQARDDGAKDSDNVLGDVMEAL
IGALYLDAGLDAARNAVRTAWGDRVRTQGSAAPQHPKSALQEWAAAHNRRTPAYEVIDRS
GPHHAPRFTVKASIGTLAEATAEGSSKSAAETAAAAALLAKLG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atcggcggcgagccggtcgcggactggatcgagcgcgcgctcggccaccgccccgccgac
cttgcgccgttcgatcgtgcgctgacgcatggcagccaggcggcggcgaattacgagcgg
cttgaattcctcggcgaccgcgtgttggggctcgtcatggccgaatggctgttcgccttg
ttcccgaacgaacccgaaggcgcgctgtccaaacggctgaacgcgctggtcaccggcgcg
gtctgcgcggatgtcgcccgtggtctcggcgtcgcgcagcatctgaagctcggcaagcag
gcccgcgacgacggcgcgaaggacagcgacaacgtgctgggcgacgtgatggaggcgctg
atcggcgcactgtatctcgacgccgggctggacgccgcccggaatgcggtccgtaccgcc
tggggcgaccgcgtccgcacccagggctcggccgcgccgcaacaccccaagtccgcgttg
caggaatgggcggcggcgcacaaccggcgcaccccggcttatgaagtgatcgaccgatcc
ggcccgcaccacgcgccgcgcttcacggtcaaggcgagcatcggcacgctcgccgaggcg
acggcggagggaagctcgaagtccgcggcggagacggcggcggcggcggcgttgctcgcg
aaactgggctag
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