Sphingomonas aliaeris: H5J25_16895
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Entry
H5J25_16895 CDS
T07559
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
sari
Sphingomonas aliaeris
Pathway
sari02020
Two-component system
sari02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H5J25_16895
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H5J25_16895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sari02022
]
H5J25_16895
02035 Bacterial motility proteins [BR:
sari02035
]
H5J25_16895
Two-component system [BR:
sari02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
H5J25_16895
Bacterial motility proteins [BR:
sari02035
]
Flagellar system
Flagellar assembly proteins
Others
H5J25_16895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_28
Sigma70_r4_2
AAA_16
HTH_23
AAA
AAA_3
AAA_19
HTH_Tnp_1
AAA_7
MerR
AAA_2
Xre-like-HTH
HTH_24
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QQV79137
UniProt:
A0A974S5Y2
LinkDB
All DBs
Position
3572779..3574089
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AA seq
436 aa
AA seq
DB search
MRSIVPSAAILRQRYALVSGLRAQGFAVRSFEDGKPQPGELFLIADGETPPAPARTVIVG
EDGDYVQPSRDGSPARIAFSPANAAVGNGFVRALVAGADAPTAADPESLALYALAERVAG
ADITVLINGPTGTGKEVLAKHIHLSSERRDGPFIAINCAALPETMLEALLFGHQKGAFTG
ASSGGEGFFRAANGGTLLLDEIAEMPIQLQAKLLRALQEREVVPIGASTPEKIDVRVIAC
ANRDLQTEVAEGRFRADLYYRLSVFPLSTRPLNERRQDIPALAATMILRHAGSRSIVPWP
ETAAIDALVGHDWPGNVRELENVIQRALLLCGGDTIRADHIVFDRPAASVQQNAANDQPG
QPATLGNIVQMHEFQAIRETLAACGGSRIETAKRLGISERTLRYRLAKAREQGEAITPAA
NQAAWGVSAANQAAGA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atccggtccatcgttccatccgcagcgatcctgcggcagagatatgcgctggtctcgggc
ctgcgcgctcaggggttcgcggtgcggtcgttcgaggacggcaagccgcagccgggcgaa
ctgttcctgatcgcggatggcgagacgccccccgcccccgcccgtacggtgatcgtcggc
gaggatggcgattacgtccagccgtcgcgcgacggcagcccggcgcgcatcgccttctcg
cccgccaacgccgcggtcggcaacggcttcgtccgcgcgctggtcgccggggccgatgca
ccgaccgccgccgatcccgaaagcctggcgctgtacgcgctggccgaacgcgtcgcgggt
gccgacatcaccgtcttgatcaacggcccgaccggcaccggcaaggaagtgctggccaag
catatccacctgtcgtccgaacgccgcgacggcccgttcattgcgatcaattgcgcggcc
ttgccggaaaccatgctggaggcgttgctgttcgggcatcagaagggtgcgttcaccggc
gcatcgtccggcggcgaaggtttcttccgcgcggcgaacggcggcacgttgctgctcgac
gagatcgccgagatgccgatccagttgcaggccaaattgctgcgcgcgttgcaggagcgt
gaggtcgttccgatcggtgcgtcgacgccggagaagatcgacgtccgcgtcatcgcctgc
gccaaccgcgatctccagaccgaagtcgccgaaggccgcttccgcgccgatctgtattac
cgcctgtccgttttcccgctgagcacgcgcccgctgaacgagcgtcgtcaggatatcccc
gcgctcgccgcgacgatgatcctgcgccacgcgggcagccgcagcatcgtgccgtggccg
gaaaccgcggcgatcgacgcgctggtcggccacgactggcccggcaacgtccgcgagctg
gaaaacgtgatccagcgcgcgttgttgctgtgtggcggcgacacgatccgggcggaccat
atcgtgttcgaccggcccgcagcatcggtgcagcaaaatgcagcaaacgatcaaccggga
cagcccgcgacgctgggcaacatcgtgcagatgcatgaattccaggcgatccgcgagacg
ctggccgcgtgcggcggcagccggatcgagacggcgaagcggcttggtatctcggaacgc
acgttgcgctaccggctcgccaaggcgcgcgaacagggtgaggcgatcacgcccgccgcc
aatcaggcagcgtggggcgttagcgccgccaatcaggcggccggggcatga
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