KEGG   Sphingomonas aliaeris: H5J25_18620
Entry
H5J25_18620       CDS       T07559                                 
Symbol
traC
Name
(GenBank) type IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
sari  Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:sari00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sari02044]
    H5J25_18620 (traC)
Secretion system [BR:sari02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   H5J25_18620 (traC)
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 DUF87 T4SS-DNA_transf Fer4_NifH CbiA FtsK_SpoIIIE TraG-D_C nSTAND3 AAA_22 AAA_16 TrwB_AAD_bind Mg_chelatase
Other DBs
NCBI-ProteinID: QQV79270
UniProt: A0A974S6U3
LinkDB
Position
punnamed1:1999..4539
AA seq 846 aa
MASKSGFMSRLLGDTRGPDKGTPSHGAPMLSQWLPYRSFDRKTDIFYQTDSIAFALEVAP
LIGADERTGEILAQLLSENIPAGARVQILAFQSPRVGSIIARYALPRFAAGGVHRKIAEH
RSAFLRSGAWFSMSKDGPFHVRNHRVFVSVSIANGKATPAELVAVRDSVVSTLQSINVAS
TRLGPVELISLIDDITAPAFDVTDHATEYSEFDPIADQCVRRDVQTVVQADRMLVSVEPL
RAVTNLSGETHYEEIRPDTFDYRFFSVRNFPNRWAPWDVQKVIGDMFSDKLRPGCPTLTS
LCLCYQDEQAAASKAGYKFMRTSSLADSKSARLLPQLKDHSREWEHVSQELRLGKKLVQA
YYAVGIISPKGSGDANERTLKSMYKAAGWDLLDERFLQIMAFMSCLPMTLANGLDSDLKR
MKRLRSMLTSTAANMLPVQGEYLGGTQPHLMFVGRRGQPFFWSPFENKAGNHNVAVFGKS
GSGKSVALQELCAAFAGVGAKIIVIDDGRSFEHMAKSLGGNFVEFRLRDGFSLNPFSMID
ETLVEQDEDYLVDALAMLKSIIGQMGRHVDKLNDTERGLIDSAVNRVWEAKGRNGAVDDI
IAALKADGTPQGSDLAIAMFPFSGGGTYGRFFQGAASVDMSNALTVFELSDLSSREELRS
VVLTAIMFLSSQTMRRMDRQIPKALLIDEAWQMLRGGSMADFVETYSRTCRKYGASLITA
TQSLNDYYKSEGSLAALENSDWSVILMQKPDTISDFQKHGRFDMDPYTESLLRSLKRNGA
EYSDIMIKGPDSQAVGRLVLDKYSATLYSSSPQTFAAIEHLIEQGLSMDEAIERVAFPEQ
YVEAAE
NT seq 2541 nt   +upstreamnt  +downstreamnt
atggcgtccaagtccggcttcatgtcgcgcctgctcggagacacgcgcggccccgacaaa
gggacgccctcgcacggtgccccgatgctttcgcagtggctcccctatcggagcttcgac
cgtaagacggacatcttctaccaaacggactcgatcgcctttgcgctcgaagtggcgccg
ctgattggcgcggatgagcggacgggcgagatcctcgcccagctcctgtccgagaacatc
ccggccggggcgcgggtccagatccttgccttccagagcccgcgggtgggctccatcatc
gcgcgctatgccctgccccgcttcgcggccggtggagttcatcgcaagatcgccgagcac
cgctccgcgtttcttcggtccggcgcgtggttcagcatgtcgaaggacggccccttccac
gtccgcaatcaccgggtgttcgtctccgtgtcgatcgccaacggcaaggcgacgccggcc
gaactggtcgcggtccgcgacagcgtcgtttcgacgctccagtcgatcaacgtcgcctcg
acccggctcggtcccgtcgagctgatcagcttgatcgacgacatcacggctccggccttc
gacgtcaccgaccacgcgaccgagtattccgagttcgatccgatcgccgaccagtgcgtt
cgccgcgacgtccagaccgtagtccaggccgatcgcatgctggtttcggtcgagccgctg
cgcgcggtcaccaacctctccggcgagacgcactacgaagagatccggccggacacgttc
gactaccgtttcttctcggtccgcaactttccgaaccgctgggcgccctgggacgtccag
aaggtgatcggtgacatgttctccgacaagcttcgcccgggctgcccgacgctcacgtcg
ctctgcttgtgctaccaggacgagcaagcggccgcctccaaggccggctacaagttcatg
cggacgtcgagtctggcggacagcaagtcggcccgcctccttccgcagctgaaggaccac
agccgcgaatgggagcatgtgagtcaggagctccggctcggcaagaagctggtccaggcc
tactatgcggtcggcatcatcagcccgaagggttcgggcgacgccaacgagcgcacgctc
aagtcgatgtacaaggccgcgggctgggacctgctcgacgagcgcttcctgcagatcatg
gcattcatgtcgtgcctgccgatgacgctggcgaacgggctcgattccgacctgaagcgc
atgaagcggctccggtcgatgctcaccagcacggccgcgaatatgctgccggtccagggc
gaatacctcggcggaacgcagccgcacctgatgttcgtcggacgtcgcggccagcccttc
ttctggtccccgttcgaaaacaaggccggcaaccataacgtggcggtgttcggcaagtcg
ggatcgggcaagtcggtcgccctgcaggagctgtgtgccgcgttcgcgggcgtcggtgcc
aagatcatcgtgatcgacgacggccggtcgttcgagcacatggccaagagcctgggcggc
aacttcgtggagttccggctccgcgacggcttcagcctcaacccattctcgatgatcgac
gagacgctggtcgagcaggacgaggactacctggtcgacgcgctcgcgatgctcaagtcg
atcatcgggcagatgggccgtcacgtcgacaagctgaacgacaccgagcgcggcctgatc
gacagcgccgtgaaccgtgtctgggaggccaagggtcgcaacggtgccgtcgacgacatc
attgcagcgctcaaggctgacggaaccccccagggttctgatctcgcgatcgcgatgttt
ccgttttcgggcggcggcacctacggccggttcttccaaggcgcggcatcggtggacatg
tcgaacgcgctcacggttttcgagctctccgacctgtcgagccgcgaggagctccggtcg
gtggtgctgaccgcgatcatgttcctgtcatcgcagacgatgcgccgcatggatcgccag
atccccaaggcgctcctgatcgacgaagcgtggcagatgctgcgcgggggctccatggcg
gatttcgtcgagacctacagccgcacctgccgcaagtacggggcatcattgatcactgcc
acgcagagcctcaacgactattacaagtcggaggggagcctcgcggcgctggagaacagc
gactggtcggtcatcctgatgcagaagcccgacacgatttcggacttccagaagcacggc
cgcttcgacatggatccgtacactgagagcctgctccgctcgttgaagcggaacggcgcc
gaatattcggacatcatgatcaagggtccggatagccaggcggttggccgtcttgtcctc
gataaatactcggcgacgctctactcctcgagcccgcaaaccttcgcggcgatcgagcac
ctgattgagcaaggcctctcgatggacgaggccatcgagcgggtcgccttccccgagcag
tatgtggaggccgcggaatga

DBGET integrated database retrieval system