KEGG   Sphingomonas aliaeris: H5J25_18715
Entry
H5J25_18715       CDS       T07559                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sari  Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:sari00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sari03032]
    H5J25_18715
   03036 Chromosome and associated proteins [BR:sari03036]
    H5J25_18715
   03400 DNA repair and recombination proteins [BR:sari03400]
    H5J25_18715
DNA replication proteins [BR:sari03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    H5J25_18715
Chromosome and associated proteins [BR:sari03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    H5J25_18715
DNA repair and recombination proteins [BR:sari03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      H5J25_18715
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QQV79283
UniProt: A0A974NYV2
LinkDB
Position
punnamed1:24271..24540
AA seq 89 aa
MNIGELAKAVAGATGSSEADAKKAINAVFDQIADAAVKGEEVSINGFGKFTVKERPERQG
RNPSNGEAITIAASKKVTFTAAKGLKDKL
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaacattggtgaattggccaaagccgttgcgggtgcgaccggctcgagcgaggcggat
gcgaagaaggcaatcaatgctgttttcgatcagattgcagacgctgcggtgaagggtgag
gaagtctcgatcaacggcttcgggaagtttacggtgaaggaacggccggaacgtcagggc
cgtaacccatcgaacggggaggcgatcacaatcgcagcctccaagaaggtcaccttcaca
gctgccaagggcttgaaggacaagctctga

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