Sphingomonas aliaeris: H5J25_20270
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Entry
H5J25_20270 CDS
T07559
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sari03036
]
H5J25_20270
Chromosome and associated proteins [BR:
sari03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
H5J25_20270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQV79417
UniProt:
A0A974NZA1
LinkDB
All DBs
Position
punnamed2:complement(114634..118839)
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AA seq
1401 aa
AA seq
DB search
MRTSAAALELDFTEPSITAARAVACSIAQNGSLQRETLLWVMEQAYGGSSADGRWSLRDA
YDMLELAEVMHLAKADLPADPGACLTALTELVASLPTHTVRSEEQIELQQFSTPAPIAYL
AALAGRIAATDLVLEPSAGTGLLATFAHRAGARLVLNEIDLARAEMLAAAFPGVAVTRHD
AELIHDLLPSTIRPTAVLINPPFSRSIGRHADPLAAFRHLRAALMRLATGGRCAAILPDR
VDTSSRAWAKATEGCTLTLHIELPANAYAKHGTSQPVKIMVLEKGTGTPAELIRCASLGD
ALAAIRVGKSAPPVTPAARPLSLLARPTGRSSLLGGALSKSRLTAPAPKAAQSQAARTID
YTVFTDPLPTGESVGVYLPYRPSRIAIASASGHPTALVESIAMGSITAPRPSYVPTLSQS
VVDAKTLSDAQLETLIYAGDAFERDIPGRFKPVEEGLSLTPDEEGRPYRTGFFLGDGTGA
GKGRQVAAIILDQWLRGRRKHIWISKTETLLEDARRDWTAVGGLALDIQHLNQWKLGTPI
GAGEGILFLTYATLRSNRGDKGTRLQQILEWVGDDYDGMVVFDEAHEMAGVAGGEGRFGT
KDGSDQGIAGVRLQNLLPRARVLYVSATGASDVNNLAYATRLGLWGPGTAFADRRTFVDS
LRRGGIAAMELIARDLKMQGLYVARALSFAGVEYDILNHNLTPDQIEVYDAYADAWAIIH
ANVRAALDATRVTDSFSKDTYNSGAKAAALSIFESTKQRFFCQLLIGMKLPALIPAIRAD
LAGGESVVIQLVSTSEAMLNRALAALTVEERANLDIELSPREFVMSYLTAAFPVGQMKTY
VDDTGKTRSEPMSDENGRPVFSQEALDMRDNLVEQLCALPVVGSALDHIIGHFGTDAVAE
VTGRSRRVIMDAHGRQRVESRSPRTNLAETDAFMRGAKKILIFSDAGGTGRSYHASLTCE
NQTRRNHYLLEPGWRADAAIQGLGRTHRTHQATAPLFRPVSTDCRGERRFISTIARRLDS
LGALTRGQRQTGGQGLFDPRDNLESDYAKESLEQWFRLLADGKLRSITLDQFQKLTGLEL
EGEGGGLKEDLPPIQRWLNRILALRIALQNAIFDEYLGLIEARIEAAKEAGTLDLGVESI
NAERITILDRTVIRRDQTSGAETEILRLETEERYKPLALDRALRILGDDARPMVNRKSGK
AAIRCSTYSLTDDDGEIVRRYELVRPTRSERMRQDLLVDTMWEEASDDEFAALWQAEVEE
MSGKTRTSTLYLVTGLLLPVWDRLPDDHVQVWRLNTDDGESFLGRIVPAPLVSKLADALI
TVSGAETAKHVITSGEIAAVGAYRLKRSLVAGQQRLELLDWPHTRLAELKAAGCFTEIIQ
HKTRMFVPVATAATVIDRITA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacttcagccgcagctctcgaactcgactttaccgaaccctcgatcaccgcagcc
agggcggtcgcgtgttccatcgcccagaacggatcgctccagcgcgagacactgctctgg
gtcatggagcaagcctatggcggatcctcggccgatggccgctggtcgctccgggacgcc
tacgacatgctcgaactcgccgaggtcatgcacctggcgaaagccgatctccccgctgat
cctggcgcgtgcctcaccgcgctcaccgagctggtcgcgagcctgcctacgcatacggtt
cgcagtgaggagcagatcgaacttcagcaattctccacccctgccccgatcgcctatctc
gctgcgctcgctggccggatcgcggctacggatctggtcctcgaaccgtctgccggcacc
ggcctcctcgccaccttcgcacaccgcgccggcgcgcgcctcgtcctcaacgagatcgat
ctcgcgcgcgccgagatgctcgccgcagccttcccgggtgtggcggtcacgcggcacgac
gccgagctgatccacgaccttctgccatcgacgatccggccaaccgccgtcctcatcaat
cctcccttctcgcgcagcatcggccgccacgccgacccactcgctgccttccggcatctg
cgggccgcactgatgcggcttgcgaccggaggccgctgtgccgccatccttcccgatcgc
gtcgacacctcgagccgcgcctgggcgaaggcgaccgaaggatgcacgctgacgctgcac
atcgagctgccggcgaacgcctatgccaagcatggcaccagccaacctgtgaagatcatg
gtgctggagaaaggcaccggcacgcctgccgagctgatccgctgcgcgtcgctcggtgac
gcgctcgccgcgatccgcgtcggaaagtcggctccacccgtcacgcctgcggcccgcccg
ctgtcgctgctcgcccgccctaccggtcgcagctctctgcttggcggagcgctgagcaag
tcgcgcctgaccgcccctgctccgaaagccgcgcagtcgcaggccgcgcgcaccatcgac
tataccgtgttcaccgatccgctcccgaccggcgagtccgtcggcgtgtatctgccctat
cggccgagccggatcgcgatcgcgagcgcgtccggccatccgaccgcgctggtagaatcg
atcgccatgggctcgatcaccgcgccccggccgtcctacgtccctaccctctcgcagtca
gtcgtcgacgcgaagacgctctccgacgcccagctcgagacgctgatctatgccggggac
gcgttcgagcgcgatattcccggtcggttcaagccggtcgaggaagggctctcgctcacg
cccgatgaggaaggccgtccctaccggaccggcttcttcctcggcgacggcaccggcgcc
ggaaagggccgccaggtcgccgcgatcatcctcgaccagtggctacgcggtcgccgcaag
cacatctggatctctaagaccgagaccctgctcgaggacgcgcgtcgcgactggaccgcc
gttggcggtctcgcgctcgacatccagcacctcaaccagtggaagctcggcaccccgatc
ggcgccggtgaaggcatcctcttcctcacctatgcgacgctccgctccaatcgcggcgac
aagggcacccggctccagcagatcctcgaatgggtcggcgacgactatgacggcatggtc
gtgttcgacgaggcgcacgagatggccggtgtcgcaggcggcgaaggccgcttcggcacc
aaggatggatcggatcaggggatcgccggtgtccgcctgcagaacctcctgccccgcgcc
cgcgtcctctacgtgtccgcgaccggcgcgtccgacgtcaacaacctcgcctacgcgacc
cggctcgggctgtggggtccgggcacggcgttcgccgatcgccggaccttcgttgacagt
ctgcgccgtggcgggatcgcggcgatggagctgatcgctcgcgacctcaagatgcagggt
ctctatgtcgctcgcgccctaagcttcgccggcgtcgagtacgacatcctcaaccacaac
ctgacccccgaccagatcgaggtgtacgacgcctatgccgacgcttgggcgatcatccac
gcgaacgtgcgcgcggcactggacgcgacccgcgttaccgacagcttctcgaaggacacc
tacaacagcggcgccaaagcggccgcgctgtcgatcttcgagtccaccaagcagcggttc
ttctgccaactcttgatcggcatgaagctgcctgccttgatccccgcgatccgggccgat
ctcgcgggcggcgagagcgtcgtgatccaactcgtctcgacgtccgaggccatgctcaac
cgggcgctggccgcgctcacggtcgaggaacgtgccaacctcgacatcgagctgtccccg
cgcgagttcgtcatgtcgtacctgacggccgccttcccagtcgggcagatgaagacctat
gtcgatgacaccggcaagacccgctccgaaccgatgtcggatgagaacggccggcccgtg
ttcagccaggaagcgctcgacatgcgcgacaacctggtcgagcagctttgcgctctcccc
gtcgtcggctcggccctcgatcatatcatcgggcatttcggcaccgatgccgtagccgag
gtgacgggccgcagtcggcgcgtcatcatggacgcgcacggtcgccagcgcgtcgagagc
cgcagcccgcgcaccaatctcgccgagacggacgctttcatgcgcggtgccaagaagatc
ctgatcttctccgatgctggcggcaccggccgcagctatcacgccagtctgacgtgcgag
aaccagacgcgtcgcaaccactatctcctcgagccgggctggcgcgctgacgccgccatc
caggggctcggccgcacgcatcgcacccatcaggcgaccgcgccgctattccggccggtg
tcgaccgactgccggggcgaacgccgcttcatctcgacgatcgcgcgccggctggacagc
cttggcgcgctcacgcgtggccagcggcagacgggcggacagggcctgttcgatccgcgc
gacaatctcgaaagcgattatgccaaggaatcgctcgaacagtggttccgcctgctcgcc
gatggcaagctgcgctcgatcacgctcgaccagttccagaagctcaccggcctcgagctg
gagggcgaagggggcggtctgaaggaagacctgccgcccatccagcgctggctcaaccgc
atcctggcgctgcgcatcgcgctccagaacgcgatcttcgacgagtatcttggtctgatc
gaggcgcggatcgaggcggcgaaggaagccgggacgctcgatctgggcgtcgagagcatc
aacgccgagcgcattaccattctcgatcgcacggtcatccggcgcgaccagaccagcggc
gccgagaccgagatccttcggctcgaaaccgaggaacgctacaagccgctcgcgctcgat
cgcgcgctcaggatcctcggcgacgatgcacggccgatggtgaaccggaagtcgggcaag
gccgcgatccggtgcagcacctactcgctgacggacgacgacggcgaaattgtgcgccgc
tacgagctggtccgcccgacccgcagcgagcggatgcggcaggatcttctcgtcgacacg
atgtgggaggaggcgagcgacgatgagttcgccgccctgtggcaggccgaggtcgaggag
atgtcgggcaagactcgcaccagcacgctatacctcgtcaccggcctgctcctgccggtg
tgggatcgcctgccagacgatcacgtccaggtctggcgtctcaacaccgatgacggcgag
tccttcctcggccgcatcgtccctgccccgttggtatccaaactcgcggacgccttgatc
accgtgtcgggcgccgaaaccgccaagcacgtcatcaccagcggcgagatcgcggccgtg
ggcgcgtaccggctgaagcgcagcctggtcgctggccaacagcgtctcgaattgctcgat
tggccgcacacgcggcttgccgagctgaaggcggccggctgcttcaccgagatcatccag
cacaagacgcggatgttcgtgcccgttgcgaccgccgcgaccgtgatcgaccgcatcacc
gcctga
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integrated database retrieval system
