Candidatus Sarcina troglodytae: HH195_02310
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Entry
HH195_02310 CDS
T06935
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarj03400
]
HH195_02310
DNA repair and recombination proteins [BR:
sarj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH195_02310
Archaeal homologous recombinant proteins
HH195_02310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QPJ84808
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All DBs
Position
522778..524004
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AA seq
408 aa
AA seq
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MRILHTADWHLGKSLEKRSRIDEQKNFLDDFIEIAKENNIDLVIIAGDIYDSSNPPAIAE
KMFYDTLKKISDNGKRLILIIAGNHDNPERLVASAPLAKEHGIIMIGTLKTIIDTGNYGR
HKIINSGEGFIEIEINGEKAIILTVPYLSEKRLNEVLYKDMDSDEERIKSYSDRVFSLFD
SLKDNYREDTINLLVSHLYAMGSEEGGSERSIQLGGSYIVNCDCFPKEAQYIALGHVHKP
QLVPGTNKKARYSGSPIHYNKKEVSYNKKCFVVDVKANEEANVKEVYFKVYKPIEIWKCE
NFDDALLKCEENKDRECWVYLEIKVDRYMREDEIKKLKELKKDILEITPIIENIHRDDES
AISLSEKSFEELFIDFYKKERMGEPDKEIIDLFLNLVYEEENGENETN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ttgagaatattacacacagcagattggcatttgggaaagagtttagaaaagagaagtaga
atagatgaacaaaaaaattttttagatgattttatagaaattgctaaagaaaataatata
gatttagttattattgcgggggatatttatgattctagtaatccgcctgctattgccgaa
aaaatgttttatgataccttaaagaaaatatctgataatggaaaaagattaattttaatt
atagcaggaaatcatgataatcctgaaagacttgtagcatcagcacctttagctaaggaa
catggaattataatgattggaacattaaaaactataattgatactggaaattatggtagg
cataaaattataaattctggtgaaggctttattgaaatagagataaatggagagaaagct
attattttgacagttccttatttaagtgagaaaaggttgaatgaagttttatataaggat
atggatagtgatgaggagaggataaaatcatatagtgatagagtgttttcactttttgat
tctcttaaggataattatagggaagatacgataaatttattagtttcgcatctttatgct
atgggaagtgaagaggggggatctgagagaagtattcagcttggtggaagttatatagta
aattgcgactgttttcctaaagaagctcagtatatagctttaggtcatgttcataaacca
caattagttccaggaacgaataaaaaagctagatattctggttcgccaattcattataat
aaaaaagaagtttcttataataaaaaatgttttgttgtagatgttaaagcaaatgaggag
gctaatgttaaagaggtttattttaaagtttataagcctatagaaatatggaaatgtgaa
aattttgatgatgcactattaaaatgtgaagaaaataaggatagagagtgttgggtttac
ttagagataaaggtagatagatatatgagagaggatgagataaaaaaattaaaagagttg
aaaaaggatattttagagattactccaataatagagaatattcatagagatgatgaaagt
gctattagtttgtcagaaaaaagttttgaggaattatttattgatttttataaaaaagaa
agaatgggagagccagataaggaaattatagatttgtttttgaatttagtttatgaagag
gagaatggggaaaatgagaccaattag
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