Candidatus Sarcina troglodytae: HH195_02315
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Entry
HH195_02315 CDS
T06935
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarj03400
]
HH195_02315
DNA repair and recombination proteins [BR:
sarj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH195_02315
Archaeal homologous recombinant proteins
HH195_02315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
DUF4320
Motif
Other DBs
NCBI-ProteinID:
QPJ84809
LinkDB
All DBs
Position
523991..527494
Genome browser
AA seq
1167 aa
AA seq
DB search
MRPIRLKIKGLNSFIDEQEIDFNKLTERGLFGIFGPTGSGKSTILDGITLALYGDLPRKS
TNYINMNCNSLNVSFEFSISDGKTKTYRVEREFKTDKKTGRPKSGKCKVLDITQVNPIIL
AESVKEVTRTCENIIGLGMNDFTKTVVLPQGSFSEFLKISGKDRREMLERLFNLQEYGEN
LEKKLSAKSKVIEKKLDIIKGKLSSYEDINLDDLEIKENEFKNNEKNIKQKSSEFLEINE
TYEEAKEIFQLKSELNSYENERNIISIEAKDIENKRGKIDNIEKSLRILNFIENYNMVLN
ELNEKNKNLEDYNLEFENIKNKKNNILKVYNEFLEKKQESVPKLKIKAERLDSELKNRKA
LRVLEEEINRLNEIIEFLKIDKEKSITQVNKTINEIDDINLNIKSLEKKYDSLKVDRNLK
KEIEEALRLEEDYLSLGKDIDESLKDIESLEKSIKLCEDKKISLQNDRDKNLEDLREYEF
LLESLNKNYPGEEKDLLNKEGLLESIKIKQEKFSDCKKKIDLNNNKILEINDKLSELNKE
KHNLKKFIDLLEKEVDDFKIQSLALKIREKLIEGDICPVCGSTHHDIEIFQKLDLSLLES
KNSKLLGNKDELLEKEREIAKLEERIIAINNESKNFEDEIKSLGKDFSENIICELQKEIY
ILENDIKRYKEEKLNLENRLNDIKDIDRDLNNDIKILNVNLENNRNNLDDKIQKRKISLE
KFNSLNNLIEEKRSTLKIDDFKEYYKDLIEKENKREELESCIKDKRAFKEKKESEREIKN
KEKEEIINSLASNEAALKEKENQKNNIKNNLNQEFTQLENINNIEKILIQTNEEIKNINE
YFEKYIDEKNCIEEKFEEINNKLNKESLKVKALEDKEKSIKEELEFNLQKENFTNVDEVE
EILKEKHTLKELKDYVKNYDDKMKVLEVNIDNVLKKLKNRDICNEELESIKINKEKVQCE
LDSLKDVNLILKQEIKNLKEKIEKFKTIMSEKKKIKHDEIIINDLRKLFSGRKFVDYIAT
ERLKYVALEASKRLKEITNNNYSLEINKDGMFIMRDFKNGGCIRDVSTLSGGETFLTSLV
LSLALSSGLQLKKAVPLELFFLDEGFGTLDDDLLETVISSLEKIQHEKLKIGIISHVESI
KNRVPVKLIVTPAESGMGGSKVKIERN
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattaggcttaaaataaaaggattaaatagttttatagatgaacaagaaata
gattttaataagcttactgaaagaggactatttggaatttttggtccaactggaagtggc
aaatccactatattagatggtataactttggctctttatggtgatttgccaagaaagagc
acgaattatataaatatgaattgcaatagtttaaatgtaagttttgagttttctatatca
gatggaaagactaaaacttatagagttgaaagggaatttaaaaccgataaaaaaacaggt
agacctaaaagtggaaaatgcaaagttttggatataacacaggttaatcctataatttta
gcagaatctgtaaaggaagttacaaggacatgcgagaatattattggtcttggtatgaat
gattttacaaaaactgtggttcttcctcaaggaagttttagtgaatttttaaagataagt
ggcaaagacagaagagaaatgttagaaaggctttttaatcttcaagaatatggtgagaat
ttagaaaaaaaattatcagcaaaaagtaaagtgatagaaaagaaattagatattataaaa
ggaaaattaagcagttatgaagatattaatttagacgatttagaaataaaagaaaacgaa
tttaaaaataatgaaaaaaatataaaacaaaagagttcagagtttttagaaataaatgaa
acttatgaggaagcaaaagaaatttttcaattaaagagtgaactaaattcttatgaaaat
gaaagaaatataataagtatagaggcaaaagatattgaaaataaaagggggaaaatagat
aacatagaaaagtcattaagaatattaaattttatagaaaattataatatggtgttaaac
gagttaaatgagaaaaataaaaatttagaagactataatcttgaatttgagaacataaaa
aataaaaagaataatattctaaaagtttataatgaatttttagaaaaaaagcaagagagt
gtgccaaagttaaagataaaagctgaaagattagatagtgagttaaaaaatagaaaagct
ttaagagtattagaggaagaaataaataggttaaatgagattattgagttccttaagata
gataaggaaaaaagtataactcaagtaaataaaacgataaatgagatagatgatataaat
ttaaatataaaaagtttggaaaaaaaatatgactctttaaaggttgatagaaatttaaaa
aaagaaattgaagaagctttaagacttgaagaggattatttgagcttgggtaaagatatt
gatgaatctctaaaagacatagaatctttggaaaagagtataaaattatgtgaggacaag
aaaataagtttacaaaatgatagggataaaaatttagaagatttaagggaatatgaattt
ttattagaaagtttaaataaaaattatccaggagaagagaaagatttattaaataaagag
ggtttattagagagtattaaaataaaacaagagaaatttagtgattgtaaaaaaaaaata
gatttaaataataataaaattttagaaataaatgataagctaagtgaattaaataaggaa
aagcataatttaaaaaaatttatagatttattagaaaaagaagtagatgattttaaaatt
caatctttggcgttaaagattagagaaaaactaatagaaggtgatatatgccctgtttgt
ggttctactcatcacgatatagaaatttttcaaaagttagatttaagtttattagaaagt
aaaaattctaagcttttaggaaataaagatgaattgcttgaaaaagaaagagagatagca
aagctagaggaaagaataatagctataaataacgagagtaaaaactttgaagatgaaata
aaatctttagggaaagattttagtgaaaatataatttgcgaactgcaaaaagagatttat
attttagaaaatgatataaaaaggtataaagaagaaaaattgaacctcgaaaatagacta
aatgatattaaggatatagatagagatttaaataatgatataaaaatattaaatgtaaat
ctagaaaataatagaaataatttagatgataagatacagaaaagaaaaataagcttagaa
aaatttaattctttaaataatttgattgaagagaaaagaagcactttaaaaatagatgat
tttaaagaatattataaggatttaatagaaaaagaaaataaaagagaagaattagagagt
tgtataaaagataaaagggcttttaaagaaaaaaaagaaagtgaaagagagataaaaaat
aaagaaaaggaggagataattaatagtttagctagtaatgaagctgctttaaaagaaaaa
gaaaatcaaaagaataatataaaaaataacttaaatcaagaatttactcaattagaaaat
ataaataatatagagaaaattttaatacagactaatgaggagataaagaatataaatgag
tattttgaaaaatatattgatgaaaaaaattgtatagaagaaaaatttgaagaaatcaat
aataaattaaataaagaaagtttaaaggttaaagctttagaagataaagaaaaatcaata
aaagaagagttagagtttaatttacagaaagaaaatttcactaatgtagatgaggttgag
gaaattttaaaggaaaagcatactttaaaggaattaaaggattatgtaaaaaattatgat
gataagatgaaagttttagaggttaatatagataatgtattaaaaaagttaaagaatagg
gatatttgcaatgaagaattagaaagtataaaaataaataaagagaaggtacaatgtgaa
ttagattctctaaaggatgtcaatttaatattaaagcaagaaattaaaaatttaaaagaa
aaaatagaaaagtttaaaacaataatgagtgaaaagaaaaaaataaaacatgatgaaata
ataataaatgatttgagaaagttgtttagtggaagaaaatttgttgactatattgcaaca
gaaaggcttaaatatgtggctttagaggcttcaaaaagacttaaggaaataactaacaat
aattattctttggaaataaataaagacggaatgtttataatgagagattttaaaaatgga
ggttgtataagagatgtttcaactttatctggaggagaaacttttttaacatctttagtt
ttgtcattggcattatctagcggacttcagctgaaaaaagcagtacctttagaacttttt
ttcctagatgaaggttttggaacgttagatgatgatttattagaaactgtaataagttct
ttagagaaaatacaacatgaaaaattaaaaataggaataataagtcatgttgaatctatt
aaaaacagagtaccagtaaaacttattgtaacaccagcagaatcaggtatgggtggaagt
aaggttaaaatagaaagaaattaa
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