Candidatus Sarcina troglodytae: HH195_03710
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Entry
HH195_03710 CDS
T06935
Name
(GenBank) LacI family transcriptional regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sarj03000
]
HH195_03710
Transcription factors [BR:
sarj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HH195_03710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_IclR
HTH_7
HTH_26
HTH_5
HTH_Crp_2
HTH_17
Sigma70_r4
HTH_24
HTH_10
HTH_49
MarR_2
HTH_31
HTH_11
HTH_Tnp_ISL3
HTH_23
HTH_29
HTH_38
HTH_19
SpoIIID
HTH_Tnp_4
HTH_22
MerR
TetR_N
Sigma54_DBD
HNF-1_N
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QPJ85067
UniProt:
A0ACD1BCM7
LinkDB
All DBs
Position
849897..850871
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AA seq
324 aa
AA seq
DB search
MKVTIQDIANMTGVSKSTVSRYLNGGYVSVENTKKIAKVIKKTGYQTNFFAKRLKSKKSG
LIGIIMPRIDSFTASKILKGIVEKIEKEGYQPIILTSDLDKEKELNCINKLYLEGMDGII
GMSFAISQEHVKLVNKLPIPVIFTGQEKYGVNCISIDDYKAGNIMGDFVREQGHKNIVYM
GVNENDIAVGINRKKGFFDAFNSDFTINYVETDFSFKSAYENSHKAVYFNPSIIVCATDN
IAIGVNRYLMEKQIKVPETISIAGFGGYDIGTAIHPSLTTVSFDYEFLGFEAADRMVSFI
EEKSFKELRDVPIQLVKRDSVRKL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaactattcaagatatagcaaatatgactggagtatctaaaagtactgtatct
agatatttaaatgggggttatgtaagcgtagaaaatacaaaaaaaatagccaaagttata
aaaaagacaggctatcaaactaatttttttgctaaaagattaaaaagtaaaaagagtggt
cttattggaataataatgcccagaatagattcttttacagcgagcaaaatattaaagggg
atagttgaaaagatagaaaaggaggggtatcaacctataattttaactagtgatttagat
aaggaaaaggaattaaattgtataaacaaattatatttagaaggaatggatggaataata
ggtatgtcatttgctatttcacaagaacatgtgaagcttgtaaataagttgcctattcca
gttatatttactggacaagaaaagtatggtgtaaattgtataagcatagatgattataaa
gctgggaatattatgggggactttgttagagaacaagggcataaaaatatagtttatatg
ggggtaaatgaaaatgatatagctgttggaataaatagaaaaaagggtttttttgatgct
tttaatagtgattttactataaattatgtggaaacagattttagttttaaaagtgcttat
gaaaattcacataaggcagtttattttaatccaagcattatagtttgtgccacagataat
attgcaattggtgtaaatagatatcttatggagaaacaaataaaagtcccagaaactatt
tcgattgcgggttttggtggttatgacataggaactgctattcatccatcgcttacaaca
gtaagttttgattatgaatttttaggttttgaagcagcagatagaatggtttcatttata
gaggaaaaaagttttaaggaattaagagatgtgccaattcaattagtaaagagggatagt
gtacggaaattataa
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