Candidatus Sarcina troglodytae: HH195_04400
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Entry
HH195_04400 CDS
T06935
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_04400 (truA)
Enzymes [BR:
sarj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HH195_04400 (truA)
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH195_04400 (truA)
Prokaryotic type
HH195_04400 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
QPJ85193
LinkDB
All DBs
Position
993292..994041
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AA seq
249 aa
AA seq
DB search
MRNIKMTIEYDGTRYKGWQKQNIKGTSINTIQDKLEILLEKMTGEKIQLIGCGRTDSGVH
AKNYIANFKTNTILSIEEMMQYCKKYLPEDIVIRDMKNASERFHARLNILSKTYIYTIDN
NEYQDVFVRKFAWHIEKKLDIKKMREASKFLLGTHDFQSFTSLKAKNGKSTVRKINYINI
EEKDNLIKIEFNGNGFLLNMVRILTGTLVKVGMGEIEPSDVLVILNAKKRAEAGEKAPAK
GLCMWCVNY
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatataaaaatgacaattgagtatgatggtacaagatataaaggatggcaaaaa
caaaatataaagggcacttcaataaatacgatacaagataaattagaaatattactagaa
aaaatgacaggtgaaaaaattcaactcattggttgtggcagaacagattcaggtgttcat
gctaaaaattatatagctaattttaaaacgaatactatcttatcaatagaggagatgatg
caatattgtaaaaagtatttgccagaggatattgttataagagatatgaaaaatgcaagc
gagagatttcatgcaaggcttaatattttatctaaaacctatatttatacaatagataat
aatgagtatcaagatgtatttgtgagaaaatttgcatggcatattgagaaaaaacttgac
attaagaaaatgagagaagcatcaaagtttcttttaggtactcatgattttcaaagtttt
acaagtcttaaagctaagaatggaaaatcaactgtaagaaaaataaattatataaatata
gaagagaaagataatttgattaagattgaatttaatggaaatgggtttttgttaaatatg
gtaagaatacttacaggaactcttgtaaaggttggaatgggggaaattgaacctagtgat
gttttagttatattaaatgctaaaaaaagagctgaagctggagaaaaagctccagcgaag
gggttatgtatgtggtgtgtaaattattaa
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