Candidatus Sarcina troglodytae: HH195_04500
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Entry
HH195_04500 CDS
T06935
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_04500
Enzymes [BR:
sarj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HH195_04500
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HH195_04500
Prokaryotic type
HH195_04500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QPJ85211
LinkDB
All DBs
Position
1021124..1021927
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AA seq
267 aa
AA seq
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MEKLNILGTGFAMATKCYNTCFTISDEQEYFLVDAGGGNTILTNLEKSNIPISKIHNMFI
SHTHNDHILGSVWIIRAVAQGILNNKYEGNFNIYGHKDVIEAIKTISFLTLQSKFTKMFE
ERILFHQVTDGYKTNILDREMVFFDIHSTKLLQYGFKMNLLNKKTLTFLGDEPCKEEIKK
YCYKVDYLFHEAFCLYEDREIFKPYEKHHATAKDACKNAKELDVKNVILYHTEDKSLETR
KEAYIKEGQEVFNGNIYVPDDLDIISL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattaaatatattaggaactggctttgcaatggcaactaaatgctataataca
tgttttacaatatcagatgagcaagaatattttttagttgatgcaggtggtggaaatacc
atactaactaatttggagaaatctaatataccaataagtaaaatacataatatgtttata
tcccatacacataatgatcatattttaggtagtgtttggattataagggcagtagctcaa
ggaatattaaataataaatatgaaggaaattttaatatttatggtcataaagatgtaata
gaagctataaaaacaattagttttttaactcttcaaagtaaatttacaaaaatgtttgaa
gagagaatattatttcatcaagttacagatggatataaaactaatatattagatagagaa
atggtgttttttgatatacacagcacaaagcttcttcaatatggatttaaaatgaatctt
ttaaataaaaagacattaacttttttaggggatgaaccttgcaaagaagagattaaaaaa
tattgttataaggttgattatttatttcatgaagcgttttgtctttatgaggatagagaa
atatttaagccttatgaaaaacatcatgctactgcaaaagatgcctgtaaaaatgctaaa
gaactagatgttaaaaatgtaatattatatcatactgaagataaatctttagaaacaaga
aaagaagcctatattaaagagggacaagaagtttttaatggaaacatatatgttcctgat
gatttagacattataagcttatag
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