Candidatus Sarcina troglodytae: HH195_05270
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Entry
HH195_05270 CDS
T06935
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj00470
D-Amino acid metabolism
sarj01100
Metabolic pathways
sarj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HH195_05270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HH195_05270
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sarj01011
]
HH195_05270
Enzymes [BR:
sarj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HH195_05270
Peptidoglycan biosynthesis and degradation proteins [BR:
sarj01011
]
Precursor biosynthesis
Racemase
HH195_05270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
UPF0128
RRXRR
Motif
Other DBs
NCBI-ProteinID:
QPJ85356
LinkDB
All DBs
Position
complement(1177067..1178113)
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AA seq
348 aa
AA seq
DB search
MSNFWCEIDLNAIEHNINIIKKLIGDKKLIGVIKGDAYGLGINTISKYLEDKVDILAVGN
IEESRQIDVKTDILLLSPLCTIEDFKDDRENLIFSIDNEEIIKELPQNTKKRVHIYVDTG
MNRMGIKINRLDSVIQELKSNHPNIEIEGLYTHLHKCKDVRYTVSQVGRFKKVAEKYKEE
IPFIHCLASSGILDNDIRKAADFTTAARGGNIIYGYAGYNRGIKKTFTYYAVPVNVCKVA
KGEQVGYGGLFTAKSDMTVGVLACGNVHGMGITRETKNNPIYDMFKILYRSIKKRYVIFN
GGRPVEILGKPNMNVTLINMTGLDKYAKLKIDLSPVISESSVEKVYIE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttttggtgtgaaatagatttaaatgctatagaacataatataaatataata
aaaaaactaattggagataaaaaattaataggtgtaattaaaggtgatgcatatggactt
ggaataaacaccatttctaaatatcttgaagataaagtagatattttagcagtaggaaat
atagaagaaagtagacagatagatgtaaaaactgatatattacttctttcacctctttgt
acaatagaagattttaaagatgatagagaaaatcttatatttagtatagataatgaggaa
attataaaggagctacctcaaaataccaaaaaaagagtacacatttatgtagatactggt
atgaatagaatgggaataaaaataaataggttggatagtgttatacaggagttaaaatca
aatcatcctaatatagaaattgaaggattatacactcatttacataaatgtaaagatgtt
agatatacagtatcacaagttggaagatttaaaaaggtagctgaaaaatacaaagaagaa
ataccgtttattcattgtttagcatcaagtggaattctagataatgatattaggaaggca
gcagattttacaactgcagctagaggaggtaatataatatatggatatgcgggatataat
agaggaataaaaaagacatttacttattacgcagttccagttaatgtatgcaaagtagca
aaaggagaacaagtaggatatggcggattatttactgctaaatctgatatgacagttgga
gttttagcttgtggaaatgtacatggaatgggaataacaagagaaactaaaaataaccct
atatatgatatgtttaaaatattatatagaagcataaagaaaagatatgtaatatttaat
ggtggaagacctgttgagatattaggaaaacctaatatgaacgtaactcttataaatatg
actggtttagataaatatgctaaactaaaaatagatttatctcctgtaatatccgaaagt
agtgtagagaaagtttatatagagtaa
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