Candidatus Sarcina troglodytae: HH195_06220
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Entry
HH195_06220 CDS
T06935
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj00470
D-Amino acid metabolism
sarj01100
Metabolic pathways
sarj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HH195_06220 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HH195_06220 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sarj01011
]
HH195_06220 (alr)
Enzymes [BR:
sarj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HH195_06220 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
sarj01011
]
Precursor biosynthesis
Racemase
HH195_06220 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Cauli_VI
Motif
Other DBs
NCBI-ProteinID:
QPJ85537
LinkDB
All DBs
Position
complement(1387131..1388291)
Genome browser
AA seq
386 aa
AA seq
DB search
MNKMIRPVWAEIDLDAIKYNIDSIKRRVDTKELIAVVKADAYGHGALDVSKTLVENGATK
LAVAVITEAMELRHGNINTPIMILGYTPLEFAADLINYDIEQTIFDLEYAKKLSEIALNL
GKKAKVHVALDTGMGRIGFLINDNSLNEILKISSLKGLEVVGIFTHFATADESDKNYSNK
QYKKFTDFNEKLISKGVNIPLKHVSNSGAIIDMPNTYLDGVRAGIVLYGYYPSEDVLKQN
LDLKKAITIKTQVAHVKILDKDEYVSYGRKFKTERKSIIATLPIGYADGYSRALTGKAKV
IINGKFAPVVGTICMDQCMIDVTDVGDVHVGDEVIVLGKDKDLKFDADDMAKAMGTINYE
VLCMIKQRIPRVYIEDGKVKSIRNYI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatgataagacctgtatgggcagaaattgatttagatgcaataaaatataat
atagatagtataaaaagaagagttgatacaaaagaattaatagcagtagttaaggcagat
gcttatggtcatggagctttagatgtgtctaaaacattagtagaaaatggggctacaaaa
cttgcagtagcagttataacagaggctatggaacttaggcatggaaatattaatacccct
attatgatacttggatatactcctttagaatttgcggccgatttaataaactatgatatt
gagcaaacaatctttgatttagagtatgctaaaaaattatcagaaatagcattaaattta
ggaaaaaaagctaaagttcatgtagcgttagatacaggaatgggaagaataggtttttta
ataaatgataatagtttaaatgaaattttgaaaatttcttctttaaaaggtttagaagtg
gttggaatatttactcattttgctaccgcagatgaaagtgataaaaattattcaaataag
caatataaaaaatttactgattttaatgaaaaactaataagtaaaggagtcaatatacct
ttaaagcatgtatcaaatagcggtgctataatagatatgcctaatacgtacttagatgga
gtaagagctggaatagttctttatggttattatccatcagaagatgtattaaaacaaaat
ttagatttaaaaaaggctataactataaagacacaggtggctcatgttaaaattttggat
aaggatgagtatgtaagttatggaaggaagtttaaaacagaaagaaagagtattatagca
acacttcctattggatatgcagatggatattctagggctttaactggaaaggctaaagtt
ataataaatggaaaatttgctccggtagttggaactatatgtatggatcaatgtatgatt
gatgtaactgatgtaggggatgttcatgtaggagatgaagttatagttctaggtaaggat
aaagatttaaaatttgatgcagatgatatggctaaagctatgggaacaataaattatgag
gttttatgtatgataaagcaaagaattccaagagtttatatagaagatggaaaagttaaa
agtatacgtaactatatttaa
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