Candidatus Sarcina troglodytae: HH195_06710
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Entry
HH195_06710 CDS
T06935
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_06710 (truB)
Enzymes [BR:
sarj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HH195_06710 (truB)
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH195_06710 (truB)
Prokaryotic type
HH195_06710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QPJ85626
LinkDB
All DBs
Position
complement(1497617..1498501)
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AA seq
294 aa
AA seq
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MNGVINIIKNTGMTSFDVVARVRKITKEKKVGHTGTLDPEASGVLPICLGKATKIIDYMM
ENEKAYRVSFKLGIVTDTYDLEGKIIREKDASNVDKEEIIRVISNFIGNIKQVPPMYSAL
KQNGVKLYELARKGIEVKREARDITIYKIENIDIQDEICMDVYCSKGTYIRSLCFDIGEE
LGVGATMTKLCRIKNGNFTLQNGLNIDDLNEENVKERIISIEEALCRFDKIVVNNKFTKL
LVNGVRVYDKRLCKDIIKNNKLYRVYDDLNTFIGLGRKDDSGFKIEKLLIEKNN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgtaataaatattataaaaaatacagggatgacttcatttgacgttgtagca
agggttagaaaaattacaaaagaaaaaaaggttggacatactggaacattagatccagaa
gcatctggagttcttccaatatgtcttggaaaagctacaaaaataatagattatatgatg
gagaatgaaaaggcttatagggtatcttttaaacttggaatagtgacagatacttatgat
ttagagggtaaaataataagagagaaagatgcatctaatgtagataaagaagaaataata
agagttatttcaaattttattggtaatataaagcaagttcctcctatgtattcagcctta
aaacaaaatggagtaaagctttatgaattagcaagaaaagggatagaggtaaaaagagaa
gcaagagatataacaatatataagattgaaaatatagatatacaagatgaaatatgtatg
gatgtctattgttctaaagggacatatattagaagtctttgttttgatattggtgaagaa
ttaggtgtcggtgctacaatgacaaagctatgtcgtataaaaaatgggaactttacatta
caaaatggattaaatatagacgatcttaatgaggagaatgtaaaagaaagaattatatca
attgaagaagctttatgtagattcgataaaatagttgtaaataataaatttactaaactt
ttagtaaatggagtgcgagtttatgataaaagattatgtaaagacattataaaaaacaat
aaattatatagagtttatgatgatttaaatacatttataggtcttggaagaaaagatgat
agtggatttaaaatagaaaagctacttatagaaaaaaacaattga
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