Candidatus Sarcina troglodytae: HH195_06875
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Entry
HH195_06875 CDS
T06935
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sarj03036
]
HH195_06875 (smc)
Chromosome and associated proteins [BR:
sarj03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HH195_06875 (smc)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
Ig_GP210_15th
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QPJ85659
UniProt:
A0ACD1BDV0
LinkDB
All DBs
Position
complement(1532040..1535597)
Genome browser
AA seq
1185 aa
AA seq
DB search
MFLKSLEIRGFKSFADKTELKFKQGITAVVGPNGSGKSNVSDSVRWVLGEQSAKILRGTK
MEDVIFSGTDYRKPLGLAQVSLTLDNTTGELPIEYNDVKITRKVFRSGDSEYLINNTPCK
LKDIVNLFMDTGIGKEGYSLIGQGKIDAILNGKNEDRRALLEEAAGIVKFKSRKIEAERK
LENTNKNLIRINDIMFTYEERIVPLEEEKLKAEKYLNYAQKLREKEIGLILNNLDKIKNE
LGNQKTKINNFLKDNLEYKEKYKEKREYLSTLKENIEIIEKNKNNKQQGYFEKKENISKL
LSEIELLRERIKGFENYINSNTLELEENEKRIIVIKDKEKKLNDDLEKNNNENIILDNKI
ESLEKKISSLNNLLKDNEREKEVINKDEIKHLKDIANCKNEIILLENQNSSFLENIQLVK
DSELGLDKNLKINIKTKQELDEKLNISLEEKSVLEKFIINSLNDEKKLQDDINKINYELN
DVNKKIHVLEANREMLKNLESEYEGYSFSVKNLMKEMTKGNLNEYEQSCSILGDTLKVKK
GYEVAVEMALGGAISNIITENENIAKTLIEYLKKKRLGRATFLPLSIIKSKKINLDDSVK
NIKGYLCLACEAVNFENKFENIVNNVLGKTIICDNIDNGLVLAKKLNYKNRIITLAGDVI
NSGGALTGGSISQKNLGIMSRKAEIEFLNDKIIKINVKRDELLSAIKKLEDKQNVLQNLK
KENTEKMYNNKIDIINLKNKINNLSNDINKIRNTLETSEVKIFDLTEKIEKNKEQILNKN
KELDGIGSKTANNNNKLKNINKNLEILSKDILELRDNLTHLKIKKAKIQEILVNLSKEIK
RYDEDYINYSKRCDVLKEYINTNFVEKENSIRKINENDFFIKKQKEELVLLEEDAKVYEN
NRKKIKLEIENVEDKLELMAVDIAKKDEEIHRNEIIYTKQNNERKFLLSRLEEEFNTNEE
SEMKNFTKIENLQEYKKQVDILKNKMNNLGQVNVNSIEEFKELSQKYNFIKMEKEDLEKA
KEELLGVIDEMLSKMKVVFRQNFNILNKNFQETFRELFKGGNAKLILDKDDELNGNIEIN
VQPPGKKVQNINLMSGGEKVLSAIAMLFAILKMKPTPFCILDEIEAALDDANVNKYAQFL
KKFSKEVQFIVITHRKGTMESSDVMYGVTMEEKGVSKIVSVDLVK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaagtctcttgaaataagaggatttaaatcatttgcagataaaactgaattg
aaatttaagcagggtataacagcagtagttggaccaaatggtagtggtaagagtaatgta
tctgattctgttagatgggttttaggagaacaaagtgctaaaattttaaggggtactaag
atggaggatgtaatattttccggtacagattatagaaaacctttaggtttagctcaagtt
tctttaacgttagataatacaacaggtgaactgccaatagaatataatgatgttaaaata
acacggaaagtttttagatcaggcgatagtgagtatttaataaataatacgccttgtaaa
cttaaggacatagtaaatctttttatggatacaggaatagggaaagaaggatattcatta
ataggacaaggtaaaatagatgctattttaaatggtaaaaatgaagatagaagggctctt
ttagaggaagcagctggaatagttaaatttaaatctagaaaaatagaagcagagagaaag
ttagagaatactaataaaaatttaataagaataaatgacataatgtttacctatgaagaa
agaatcgttcctttagaagaggaaaaacttaaggcagaaaaatatttaaattatgctcaa
aagcttagagaaaaagaaataggtttgattttaaataatttagataaaataaaaaatgaa
ttgggaaatcaaaagactaaaattaataattttttaaaggataatttagagtataaggaa
aagtataaagaaaaaagagaatatttaagtactttaaaagagaatatagaaattattgaa
aaaaataaaaacaacaaacaacaaggttattttgaaaaaaaagaaaacatatcaaaatta
ttaagtgaaattgaacttttaagagaaagaataaaaggttttgaaaattatataaattct
aatactttagaattagaagaaaatgaaaaaagaataattgttataaaagataaagaaaaa
aagttaaatgatgatttagaaaaaaataataatgaaaatataattttagacaataaaata
gaaagcttagagaagaaaataagcagtttaaataatcttttaaaagataatgaaagagaa
aaggaagttataaataaagatgaaataaaacatttaaaggatattgcaaactgtaaaaat
gaaataatattattagaaaatcaaaattcttcttttttagaaaatatacaattagtaaaa
gatagtgagctaggtttagataaaaatttaaagataaatataaaaactaaacaggaatta
gatgaaaaattaaatatttcgttggaagaaaaaagtgttttagaaaaatttattattaat
tctttaaacgatgaaaaaaaattgcaagatgacattaataaaataaattatgagttaaat
gatgttaataaaaagatacatgttttagaagctaatagagaaatgttaaaaaatctagaa
agcgaatatgaagggtatagcttttctgtgaaaaatttaatgaaagaaatgacaaaggga
aatcttaatgagtatgagcagtcgtgttctattcttggtgatactctaaaggttaaaaag
ggatatgaggtagctgtagagatggccttaggtggtgctatttctaatataataactgaa
aatgaaaatatagcgaaaactttaatagagtatttaaagaaaaaaagattaggaagagca
acatttttaccgttgtctataataaaatcaaaaaaaataaatttagatgatagtgttaaa
aatattaagggatatctatgtttagcttgtgaagctgtgaattttgaaaataaatttgaa
aatattgtaaataatgttttgggaaaaactataatatgtgataatatagataatggcttg
gttctagctaaaaaactaaattataaaaacagaataataactttagcaggtgatgtaata
aattcaggaggagctttaacgggaggaagtatatcacaaaaaaatcttggtataatgtca
agaaaggctgaaatagaatttttaaatgataaaataataaaaattaatgttaaaagagat
gagttactttcagctataaaaaaattagaagataaacaaaatgttttgcaaaatttgaaa
aaagaaaatactgaaaaaatgtataataataaaatagatattataaatttaaaaaataaa
ataaataatttgagtaacgatataaataaaatacggaatactcttgaaacatcagaagta
aaaatatttgatttaacagaaaaaatagaaaaaaataaagaacaaattttaaataaaaat
aaagaattagatggtataggaagtaaaacagctaataataataataagctaaaaaatatt
aataaaaatttagaaatattatcaaaagatatattggaattgagagataatttaactcat
cttaaaattaaaaaagcaaagattcaagaaattttggtgaatttatctaaagagattaaa
aggtatgatgaagattatataaattattcaaaaagatgtgatgtattaaaagaatatata
aacacaaattttgtagaaaaagaaaatagtataagaaagataaatgaaaatgattttttt
attaaaaagcaaaaagaagaacttgttttacttgaggaagatgcaaaagtttatgaaaat
aatagaaagaaaataaagttagaaatagaaaatgttgaagataaattggaacttatggca
gttgatatagctaaaaaagatgaggaaatccatagaaatgaaataatttatacaaaacaa
aataatgagagaaaatttctattatctagattagaagaagaatttaatacaaatgaagaa
agtgaaatgaaaaatttcaccaaaatagaaaatttgcaagagtataaaaaacaagttgat
atacttaaaaataagatgaataatttaggtcaagtcaatgtaaattcaattgaagaattt
aaagaattatcgcaaaaatacaactttataaaaatggaaaaggaagatttagaaaaagct
aaagaagaactcttaggtgttatagatgaaatgttatctaaaatgaaagttgtatttaga
caaaattttaatattttaaataaaaattttcaagaaacatttagagaattatttaaaggt
ggaaatgcaaaacttatactagataaagatgatgaattgaatggaaacattgaaataaat
gttcaaccgcctgggaaaaaggttcaaaatataaatcttatgtctgggggggaaaaagta
ttatctgccatagcaatgctttttgctattttaaagatgaaacctactccattttgtatt
ttagacgaaatagaggcggctttagatgatgcaaatgtaaataaatatgcacagttttta
aagaaattctctaaagaggttcaatttatagttataactcatagaaagggtacaatggaa
tcttcagatgtgatgtatggggttactatggaggaaaaaggagtatcaaagatagtatca
gtagatttagtaaaatag
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