Candidatus Sarcina troglodytae: HH195_07160 Help Entry HH195_07160       CDS       T06935                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism sarj  Candidatus Sarcina troglodytae Pathway sarj03018   RNA degradation Brite KEGG Orthology (KO) [BR:sarj00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     HH195_07160  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sarj03019]     HH195_07160 Messenger RNA biogenesis [BR:sarj03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      HH195_07160 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 ODP CFAP54_N Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  QPJ85715 LinkDB All DBs Position complement(1592444..1594111) Genome browser AA seq 555 aa AA seqDB search MKREKLKVKIIPLGGLNEIGKNITVVEFKDDIVIIDCGLKFPDEDMFGIDVVIPDISYLV KNSEKIRGIFLTHGHEDHIGSLPYFLKQLNVPIYGTKLTLGIVETKLKEHGLLSTTELIT VKPRDVIKLNSVSVEFIKTNHSIADSVAIAIHTPIGAILHTGDFKVDYTPIDGEVMDFAR FAELGRKGVLAMLADSTNVERPGYTMSERVVGESFKRIFAKAKGRIIVATFASNIHRIQQ IVEAAQLYDRKIAVSGRSMENIVQVAIELGYLNIDPDVLLSVDNINKYPNEKIVVITTGS QGEPMSALARMAASEHRKLNILEGDTVIISATPVPGNEKLVSKVINQLFKKGAEVIYGSL QSIHVSGHACQEELKLMQALVKPRFFIPVHGEYRHLKQHGELAVRVGLPEKNFVIADNGD IIEITRDSIRKNGTVSSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIDKNTSRI IAGPDIISRGFVYVRESEDLMDEAKSIVREVLKDCEDKNITDWATMKSSIRDGLRLYLYE KTKRKPMILPIIMEI NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgaagcgtgaaaaactaaaggttaaaattatacctttaggtgggctaaatgaaattgga aagaacattacggttgttgaatttaaagatgatatagtaattattgattgtggtcttaag tttccagatgaagatatgtttggtatagatgtagttataccagatatatcttatttggta aaaaattctgaaaaaattagaggaatatttttaacgcatggacatgaagaccatattggg tcattaccatattttctaaagcaattaaatgttcctatttatggtacaaagcttacctta ggaatagtcgaaactaaattaaaggaacatggtttattaagtactacggaacttattaca gttaagccaagagatgttataaagttaaactcagtttcagtagaatttataaaaacaaat catagtatagcagattcagtagctatagctattcatacgcctataggagcgatacttcac acaggagattttaaggttgattacactcctatagatggtgaggttatggattttgctagg tttgcagaacttggaagaaaaggagttttagcaatgttagcagattctacaaatgttgaa agacctggatatactatgtctgagagagttgttggagaaagttttaaaagaatatttgca aaagctaaaggcaggataatagttgcaacatttgcatcaaatattcacagaattcagcaa atagtagaagcagcacagctatatgatagaaaaatagcggtatctggaagaagtatggaa aatatagttcaagttgcaattgaattaggttatttaaatatagatccagatgttttactt tcagtagataatataaataagtatccaaatgagaagattgtggttataacaacaggaagt caaggagagccaatgtccgctttagctaggatggcagcttcagagcatagaaaattaaat attttagagggcgatactgtaataatttcagcaactccagtaccaggaaatgaaaaatta gtatcaaaagttataaatcaattgtttaaaaaaggtgcagaagttatatatggttcgtta caatctatacatgtatcaggtcatgcctgtcaagaagaattaaaacttatgcaggcttta gtaaaaccaagattttttattccagttcatggagaatataggcatcttaagcaacatgga gaattagctgtacgtgtaggattgccagaaaaaaattttgtgattgcagataatggggat attatagagataactagagatagtataagaaagaatggaacagtttcttcggggcaagtt tttgtagatggtttaggtgttggagatgtaggaaatattgtgcttagagatagaaaacat ttatctcaagatggtattttaactgtagttgttacaatagataaaaatacatcaagaatt attgcaggaccagatataatatctagaggctttgtttatgtaagagagtcagaagactta atggatgaggcaaagtctatagtcagagaggttttgaaagattgcgaagataaaaatata acagattgggcaacaatgaaatctagtataagagatggcttaagattatacctttatgaa aagacaaaaaggaaacctatgatattacctataataatggaaatatag

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