Candidatus Sarcina troglodytae: HH195_07420
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Entry
HH195_07420 CDS
T06935
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sarj02044
]
HH195_07420
02035 Bacterial motility proteins [BR:
sarj02035
]
HH195_07420
Secretion system [BR:
sarj02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HH195_07420
Bacterial motility proteins [BR:
sarj02035
]
Pilus system
Pilus assembly proteins
HH195_07420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
UPF0370
Motif
Other DBs
NCBI-ProteinID:
QPJ85765
LinkDB
All DBs
Position
complement(1634015..1635040)
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AA seq
341 aa
AA seq
DB search
MMKFFLDNSLIVFCSNLNSYISSGIPIKKALSLVKLSLKNKTYKESMDRVIEGISQGKTL
SKSIKDEGDIYDDILGDLISIGEESGNLELVLKKLSNHYVRQKEFFNKLMKILIYPIFLT
FIVIFVIIFYLLVILPSFKSLYDDLEGEPSKFLNIIINYLNFIENVKYSKFIVLIYGIIS
LMLVGIILNFIRKREFIRNNKFLKLYYENNLIFIIELIVTSGVSLNKALDSLSYSLKSIY
LKENIILLKEAINKGQTLSGALKDLNCISDITISFIFSGEESGRLEENIKILSNILEKDF
DEKINIITKLLEPMVMIFLGGIVVFMMMLIFVPVYECIKYV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttttttcttgataatagcctaattgtattttgttcgaatttaaatagctat
atatcttcagggatacctataaagaaagcactaagtcttgtaaagctttcccttaaaaat
aaaacttataaagaatcaatggatagagtaatagaggggataagccagggtaaaacatta
tctaaaagcattaaagatgaaggggatatatatgatgatattttaggtgatttaataagt
attggagaagaaagtggaaatttagaactggttttaaaaaagcttagtaatcattatgta
agacaaaaagagttttttaataagctgatgaaaatattaatatatccgatatttttaaca
tttatcgtaatctttgttatcatattttatttacttgtaatattgccaagctttaaaagt
ctttatgatgatttagaaggtgaaccatctaaatttttaaatataataattaactattta
aactttatagagaatgttaaatattctaaatttatagttttaatttatggaattatatct
ttaatgctagtaggtattattcttaattttataagaaaaagagaatttataaggaacaat
aagtttttaaagctttattatgaaaataatcttatttttataattgaacttatagtcaca
agtggtgtttcacttaataaagcattagattcattaagttatagtttaaaatcaatttat
ttaaaggaaaatataattttattaaaggaggctataaataaggggcaaactttaagtgga
gctttaaaagatttaaattgtatatcggatataactataagttttatatttagtggagaa
gagtctggaagattggaagaaaatataaaaattttaagtaacatattagaaaaagatttt
gatgaaaaaataaatataattacaaaacttttagagcctatggtaatgatttttttagga
ggtatagtggtttttatgatgatgctaatatttgttcctgtatatgagtgtattaaatat
gtataa
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