Candidatus Sarcina troglodytae: HH195_07425
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Entry
HH195_07425 CDS
T06935
Name
(GenBank) type II/IV secretion system protein
KO
K02652
type IV pilus assembly protein PilB
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sarj02044
]
HH195_07425
02035 Bacterial motility proteins [BR:
sarj02035
]
HH195_07425
Secretion system [BR:
sarj02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HH195_07425
Bacterial motility proteins [BR:
sarj02035
]
Pilus system
Pilus assembly proteins
HH195_07425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_30
nSTAND3
AAA_11
ResIII
AAA_22
DEAD
AAA_14
AAA_29
AAA_16
SMC_N
ABC_tran
AAA_23
AAA_18
AAA_21
FtsK_SpoIIIE
AAA_7
HerA_C
PhoH
MobB
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-ProteinID:
QPJ86540
LinkDB
All DBs
Position
complement(1635021..1636394)
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AA seq
457 aa
AA seq
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MKIDLKDIDLSFMKGITKEMARDMNIISARGEENKIYFYTDKETEVKKSYLGLLFDKKIE
FIKGDKDEIKFLINKCYSIEASKNIKEDNFYILIEDAIKMRASDIHIEPKSQWTNIRFRI
DGDLRLINKIQKSEYEILVNKIKVKGNMNISDKLKAQDGKISFFSNGNLSYDLRVSSLPT
VYGEKIVIRILYKREDLLSIEKLNFTDYQKEKIKRILSFKNGMVVINGPTGSGKSTTLYA
LLNSIDKDGINISTIEDPIEFELDGVTQTNVNEKVNLTFSTGLKYILRQDPDVILIGEIR
DEETAKIAVRASITGHKVYSTIHANNGSNIFSRLLDMGVEKYLLDEALKGVITQRLVRTL
CEKCKEEVSINDDKYKFLRGKTIFKAKGCMECNYTGIKGRTMVSKVTISDKKLRKHYKND
ENELLESCKNLLLQGQISLEEYILFKESEMLNDEVFS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ataaaaatagatttaaaagatatagatttatcctttatgaaaggtataacaaaagagatg
gcaagagatatgaatataatatcggcaaggggagaggaaaataaaatatatttttatact
gataaagaaacagaagtgaaaaagagttatttaggcctcttatttgataaaaaaattgag
tttataaaaggagataaggatgaaataaaattccttataaataaatgttatagcatagaa
gcttcaaaaaacataaaagaggataatttttatattttaatagaagatgctataaaaatg
agggctagtgacattcatatagaacccaaaagtcaatggacaaatattagatttaggata
gatggggatttaagattaataaataagattcaaaaaagtgaatatgaaattttagtaaat
aagataaaagttaaaggaaatatgaatatatcagataaattaaaagcccaagatgggaaa
atatctttttttagtaatggaaatttaagttatgatttacgagtatcatcacttccaacg
gtttatggagaaaaaatagttataagaattctttataaaagagaagaccttttatctata
gaaaaactaaattttacagattatcaaaaagaaaagataaaaagaattttatcttttaaa
aatggaatggtagttataaatggtccaacaggaagtggaaaatctacgacattatatgca
cttttaaattctatagataaagatggcataaatataagtacaatagaagaccctatagag
tttgaattagatggagtaactcaaactaatgtaaatgaaaaggtgaacctaactttttca
acagggttaaaatatatattaagacaagaccctgatgtaatattaattggagaaataaga
gatgaggaaacagctaaaattgcagtaagagcatctataacaggacataaggtttactca
actattcatgcaaataatggttctaatatttttagtcgccttttagatatgggagttgaa
aaatatttattagatgaggcactaaaaggtgttataactcaaaggttagttagaacatta
tgtgaaaaatgcaaagaagaagtcagtataaatgatgataaatataaatttttaagagga
aaaactatatttaaagctaaaggatgcatggaatgtaattatacaggaattaaaggtaga
actatggtatctaaagtaactataagtgataaaaagttaagaaaacattataaaaatgat
gaaaatgaacttttagaaagttgtaaaaatcttttgttacaaggacaaatatctttagaa
gaatatattctatttaaagaaagtgagatgttaaatgatgaagttttttcttga
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