Candidatus Sarcina troglodytae: HH195_07865
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Entry
HH195_07865 CDS
T06935
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH195_07865
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sarj01007
]
HH195_07865
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_07865
Enzymes [BR:
sarj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
HH195_07865
Amino acid related enzymes [BR:
sarj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HH195_07865
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HH195_07865
Prokaryotic type
HH195_07865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF7129
Zn_ribbon_8
tRNA-synt_1f
HypA
Zn_ribbon_RPB9
DUF6487
zf-C2HC5
NCD3G
Siah-Interact_N
ABC_tran_CTD
Zn_ribbon_15
DUF7130
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QPJ85847
LinkDB
All DBs
Position
complement(1727194..1729836)
Genome browser
AA seq
880 aa
AA seq
DB search
MEDKNISTTYNPKEFEERLYNVWQEKKYFTPKVDKSKKPYTIIMPPPNITGKLHLGHALD
NTLQDMLIRFKRMQGYCTLWLPGEDHASIATEVKVENELLKQGLNKKEMGREAFLEKVWE
WTDEYREKIREQLKKVGVSADFTREAFTMDENLSKAVKHVFVKLYNEGLIYQGNRITNWC
PKCQTALSDAEIEYAEKEGSFWHIKYPVVGSDEFLEIATTRPETLLGDTAVAVNPNDERY
KHLVGKMLKLPLTDREIPVVADDYVDLEFGTGAVKITPAHDPNDFQVGLRHNLKQIRIMD
DAGVINELGGKYQGLDRYEARKAMVADLEAQGLLVKIKPHTHNVGTHDRCGTVIEPIISK
QWYVKMDSLAKPAIEVVKNKKTKFVPERFEKTYFNWMENIQDWCISRQLWWGHRIPVYYC
QDCGEIMVSEHDVTTCTKCGSSKIEQETDVLDTWFSSALWPFSTLGWPDKTEDLEYFYPT
STLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLIHGIIRDSQGRKMSKSLGNGVDPLEV
IDEYGADALRFMLVTGNAPGNDIRYIPERVEAARNFANKIWNASRFVMMNLDRDIMNQYI
DVKDYSLADKWILSRMNGLVKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKPVLY
GEDEKSKGIVFNVLYKVLNTGLKLLHPVMPFITEEIYTHLSTETESITIASWPEYDESLV
NEKSEKDMEFIMEAIKALRNLRASMNVPPSRKAKIIAYISEEAKDAFINGAAYLEKLASA
SEVTFIDNKDNLAENLVSVVVKGGELFLPLLDLVDREKELDRLNKEKDKLEKEIDRVEKK
LSNEKFVSKAPEAVVNEEKAKGEKYKEMLNAVLERISALK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaaaatatctctacaacttataacccaaaagaatttgaagaaagattatat
aatgtttggcaagaaaaaaaatactttactccaaaagttgataagagtaaaaaaccttat
acaataataatgccaccaccaaatataactggaaaacttcatttagggcatgcgcttgac
aatactttacaagatatgcttataagatttaagagaatgcaaggatattgtactttatgg
cttccaggggaagaccatgcatctattgcaacagaagttaaagttgaaaatgaactttta
aaacaaggtcttaataaaaaggaaatgggaagagaagcattcttagaaaaagtttgggaa
tggacagatgagtatagagaaaaaattagagaacaacttaaaaaagttggagtttctgct
gattttacaagagaagctttcactatggatgaaaatttaagcaaagctgtaaagcatgta
tttgttaaactttataatgaagggcttatatatcaaggaaacagaataactaactggtgt
cctaagtgtcaaacagctctatctgatgctgaaattgaatatgcagaaaaagaaggaagc
ttctggcatataaaatatccagttgtaggttctgatgaatttttagaaattgcaacaact
agaccagaaactcttttaggggatactgctgttgctgtaaatcctaatgatgaaagatat
aaacacttagttggtaaaatgttaaaattacctttaacagatagagaaataccagttgta
gctgatgattatgttgatttagaatttggaactggtgcagttaaaataacacctgctcat
gaccctaatgatttccaagtaggtttaagacataacttaaaacaaataagaattatggat
gatgctggagttataaatgaattaggtggaaaatatcaagggttggatagatatgaggca
agaaaggctatggttgctgatttagaggctcaaggtttacttgttaaaataaaacctcat
acacataacgttggaactcatgatagatgcggaactgttatagaacctataatatcaaaa
caatggtatgtaaaaatggattctttagcaaaaccagccatagaagttgttaaaaataaa
aaaactaagtttgttcctgaaagatttgaaaagacatattttaactggatggaaaacatt
caagattggtgtatatcaagacaattatggtggggacatagaatacctgtttactactgt
caagattgtggtgaaataatggtatctgaacatgatgtaactacatgtacaaaatgtggt
tcaagcaaaatagaacaagaaacagatgttttagatacttggtttagttctgcactatgg
ccattttcaactcttggttggccagataaaacagaggatttagagtatttttatccaaca
tcaacattagttactggatatgatattatattcttctgggttgcaagaatgattttctca
ggaatacacaacatgggagaaactccatttgacactgtattaattcatggtattataaga
gattctcaaggaagaaaaatgagtaaatctttaggaaatggtgtagacccactagaagtt
atagatgaatatggtgcagatgctttaagatttatgttagttactggaaatgcaccagga
aatgatataagatatatccctgaaagagtagaagctgctagaaactttgcaaataagatt
tggaatgcttcaagatttgttatgatgaacttagatagagatatcatgaaccaatatata
gatgttaaagattatagcttagctgataaatggattttatcaagaatgaatggtttggta
aaagaagttactgaaaacatggaaaaatatgaacttggaatagcgcttcaaaaggttcat
gatttcctttggacagaattctgtgattattatatagaacttgttaaaccagttttatat
ggagaagatgaaaaatctaagggaatagtatttaatgttttatataaagttttaaataca
ggacttaagcttttacacccagtaatgccatttataacagaggaaatatatactcactta
agcacagaaactgaatcaataactatagcttcttggccagaatatgatgaaagcttagta
aatgaaaaatctgaaaaagatatggaatttataatggaagctataaaggctttaagaaat
ctaagagcttcaatgaatgttccaccatctagaaaagctaaaataatagcttatatttca
gaagaggctaaagatgcgtttataaatggtgcagcatatttagagaagttagcttcagca
tctgaagtaacatttatagataataaagataatttagctgaaaatttggtttcagtagtt
gttaaaggtggagaattattcttaccacttttagaccttgtagatagagaaaaagaatta
gatagattaaataaagaaaaagataaactagaaaaagagatagatagagtagagaaaaaa
ctttcaaatgaaaagtttgtaagtaaggcaccggaagctgttgtaaatgaagaaaaagct
aaaggtgaaaaatataaagaaatgttaaatgctgttctagaaagaataagtgctttaaaa
taa
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