Candidatus Sarcina troglodytae: HH195_07910
Help
Entry
HH195_07910 CDS
T06935
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj00260
Glycine, serine and threonine metabolism
sarj00460
Cyanoamino acid metabolism
sarj00630
Glyoxylate and dicarboxylate metabolism
sarj00670
One carbon pool by folate
sarj00680
Methane metabolism
sarj01100
Metabolic pathways
sarj01110
Biosynthesis of secondary metabolites
sarj01120
Microbial metabolism in diverse environments
sarj01200
Carbon metabolism
sarj01230
Biosynthesis of amino acids
sarj01240
Biosynthesis of cofactors
sarj04981
Folate transport and metabolism
Module
sarj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HH195_07910
09102 Energy metabolism
00680 Methane metabolism
HH195_07910
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HH195_07910
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HH195_07910
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HH195_07910
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HH195_07910
Enzymes [BR:
sarj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HH195_07910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
PEX14-like_2nd
SelA
Motif
Other DBs
NCBI-ProteinID:
QPJ85855
LinkDB
All DBs
Position
complement(1737348..1738580)
Genome browser
AA seq
410 aa
AA seq
DB search
MDFSNVQRTDNLISELINKELKRQQQSIELIASENFTSKAVMEAMGSYLTNKYAEGYPNK
RYYGGCSVVDEIENIAIERAKKLFNAEHVNVQPHSGSQANMAVYFSVLKPGDVVLGMDLS
NGGHLTHGSSVNFSGKIFNFVSYKVNKYTEEIDYEEVKKLALKHKPRMIVAGASAYSRSI
DFEKFSSIAKEIGAYLMVDMAHIAGLVATNFHKSPVPYADFVTSTTHKTLRGPRGGLILC
KKEYAKVIDKNIFPGIQGGPLMHIIAGKAVCFKEALEPEFKQYINQVVLNAKILAKSLQN
YGFKLVSNGTDNHLILVDLNNKNITGKEAENILDSIGITVNKNTVPNETKSPFITSGIRI
GTPAVTTRGFKEDDMREIASIINDTIENRGRNLSQIQGRVNTLCEKYPLY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtggatttttcaaatgtgcaaagaacagataatttaataagcgagcttataaataaggaa
ttaaaaaggcaacagcaaagtattgaacttatagcatcagaaaattttacaagtaaggct
gtaatggaggctatgggatcatatttaactaataaatatgctgaagggtatccaaataaa
agatattatggagggtgttctgttgttgatgaaatagaaaatattgctatagaaagagcg
aaaaaactttttaatgcagagcatgtaaatgtacaacctcattcaggatcacaggctaat
atggctgtatatttttcagttttaaagccaggtgatgtagttttagggatggatttaagt
aatggtggacatttaacacatggatcatcagtaaatttttcaggtaaaatatttaatttt
gtatcttataaagttaataagtatacagaggaaattgattatgaagaggtaaagaaatta
gcattgaaacataaacctagaatgatagtagcaggagccagtgcatactcaagaagtata
gattttgagaaattttcaagcattgctaaggaaataggtgcttatttaatggtagatatg
gctcatattgctggacttgtagcaacaaattttcacaaatctccagtgccttatgctgat
tttgtaacttctacaacacataaaacgttaagaggaccaagaggtgggcttatattgtgt
aaaaaagaatatgcaaaagtaatagataagaacatatttccagggattcaaggaggccca
cttatgcatataatagcaggtaaagctgtgtgttttaaggaagcattagagcctgagttt
aagcaatatataaatcaggttgtgttaaatgctaaaattttggctaaatcattacaaaat
tatggatttaagttggtttctaatggaacagacaatcatttaatattagttgatttaaat
aataaaaatataaccggaaaagaagctgaaaatattttagatagcataggtataacggta
aataaaaatacggtgcctaatgaaactaaaagtccatttataactagtggaataagaata
ggaactcctgctgttacaactagaggttttaaggaagatgatatgagagaaattgcaagt
ataataaatgatactatagaaaatagagggagaaatttaagtcaaatacagggtagagtt
aatactctttgcgaaaaatacccactttattag
DBGET
integrated database retrieval system