Candidatus Sarcina troglodytae: HH195_07925
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Entry
HH195_07925 CDS
T06935
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH195_07925 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sarj01007
]
HH195_07925 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_07925 (aspS)
03029 Mitochondrial biogenesis [BR:
sarj03029
]
HH195_07925 (aspS)
Enzymes [BR:
sarj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HH195_07925 (aspS)
Amino acid related enzymes [BR:
sarj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HH195_07925 (aspS)
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HH195_07925 (aspS)
Prokaryotic type
Other AARSs
HH195_07925 (aspS)
Mitochondrial biogenesis [BR:
sarj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HH195_07925 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QPJ85858
LinkDB
All DBs
Position
complement(1740134..1741933)
Genome browser
AA seq
599 aa
AA seq
DB search
MGEALNGLKRSIMCGEARESHIGQKVTVMGWVQRNRNLGGLQFLDLRDREGILQIVFKDT
LSEEILAKAKQIRPEYCIAVTGEIAKRESINNNIPTGMVELIAEGVKILSESETPPIYIK
EDLDAAESIRLKYRYLDLRRPDMQKIFAIRSKTTKAIRDYLEENNFLDIETPVLGKSTPE
GARDYLVPSRNFQGKFYALPQSPQLYKQLLMMSGFDRYYQIAKCFRDEDLRANRQPEFTQ
VDMELSFVEEDDIMAINEGLIAYVFKKVAGVNVKLPIKRMKFKDAMEKYGSDKPDLRFGM
EITNITQDVKDMDFVVFKSAIENGGSVRALCLENGASLGRKQLDKLGKFVKTYKAKGLAW
IQLKPEGMKSSIAKFLTDDVTNAIINTMNAKTGDAILIVADKDSVVLPSLGALRLHLAKE
YDLIKDKSEFNFTWVTEFPFFEYSEEEERFKACHHPFTAPMDEDLEFVESDPARVRAKAY
DLVLNGEELGGGSIRIHDTAIQERMLKALGFTKERAWESFGFLLQALTFGAPPHGGLAFG
LDRMVMFLAGTENIKDVIAFPKNQNAFCYLTEAPNVVEEKQLDELGIKVSVSEEKTVEE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagctttaaatggactaaagcgtagtattatgtgtggtgaagctagagaaagt
catataggacaaaaagtaactgtaatgggttgggttcaaagaaatagaaatcttggagga
cttcaattcttagatttaagagatagggaaggaatacttcaaatagtttttaaagatact
ttaagcgaagaaatattagctaaagctaagcaaataagaccagaatattgtatagcagta
actggagaaatagctaaaagagaatcaataaacaacaatataccaactggtatggtggaa
cttattgcagaaggtgttaaaattttatctgagtcagaaactccaccaatatacataaag
gaagacttagatgcggcagaaagtataagattaaaatatagatatttagatttaagaaga
ccagatatgcaaaaaatatttgcaataagaagtaaaactactaaggctattagagattat
ttagaagaaaataatttcttagatattgaaacaccagtgcttggaaaatcaactccagaa
ggtgctagggattatttagtgccatcaagaaattttcaaggtaaattttatgcgcttcca
caatctccacaattatataagcaattattaatgatgtctggttttgatagatattatcaa
attgctaaatgttttagagatgaggatttaagagctaatagacaaccagaatttactcaa
gtagatatggagttaagctttgttgaagaagatgatattatggctattaatgaaggacta
attgcttatgtatttaaaaaagttgcaggagtaaatgttaaacttcctataaagagaatg
aaatttaaagatgccatggagaagtatggtagtgataaaccagatttaagatttggaatg
gaaataacaaatataactcaagatgttaaggatatggattttgtagtatttaaatctgca
attgaaaacggcggaagtgttagagctttatgcttagaaaatggagcttcacttggtaga
aaacaacttgataaactgggtaaatttgttaaaacttataaggctaaaggtcttgcatgg
atacaattaaaaccagaaggaatgaaatcttcaatagctaaatttttaactgatgatgtt
acaaatgcaataattaatacaatgaatgctaagacaggagatgctattttaatagtagct
gataaagattcagtagtattaccaagtcttggagcattaagattacatttggctaaagag
tatgatttaattaaagataaaagtgagtttaatttcacatgggttacagagttcccattt
tttgaatatagtgaagaagaagagagatttaaagcttgtcaccacccatttacagcacct
atggatgaagatttagaatttgtagaatctgatccagctagagtaagagctaaggcttat
gatttagttttaaatggtgaagagttaggtggaggttcaattagaatccatgatacagct
attcaagaaagaatgcttaaagcgttaggttttactaaagaaagagcgtgggagtcattt
ggtttcttattacaagcattaacatttggtgcaccaccacatggaggattagcatttggt
ttagacagaatggtaatgtttcttgcaggaactgaaaatataaaagatgttatagcattc
cctaaaaaccaaaatgcattctgttatttaactgaagctccaaatgtagtcgaggaaaaa
caattagatgaacttggaattaaagtttcagtaagcgaagaaaagacagtagaagaataa
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