Candidatus Sarcina troglodytae: HH195_08170
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Entry
HH195_08170 CDS
T06935
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sarj03000
]
HH195_08170
Transcription factors [BR:
sarj03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
HH195_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
Sigma70_r4
HTH_PafC
GntR
HTH_20
Put_DNA-bind_N
CggR_N
Motif
Other DBs
NCBI-ProteinID:
QPJ85906
LinkDB
All DBs
Position
complement(1795236..1795868)
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AA seq
210 aa
AA seq
DB search
MKLTPRQEEIVKLVKEGEPVTSETLATKLGVTRAALRPDLAILTMIGILDARPKVGYVYC
EGNKTNILYEEIMNSKVLDIMSKPITVNEETMVYDAIVHLFLNDVGTMFVENKGVLVGAV
SRKDFLKIAIGGTDIYKVPVGIIMTRMPNIIYALEDETAYNVAKRIIEHEIDSVPVVRKL
KDDLGKEKLLIVGKISKTNITRLFVNLGNY
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaacacctagacaagaggaaattgttaaacttgttaaagaaggggaacctgtt
acatcagaaacattagctacgaaacttggagtaactagagctgcccttagaccagattta
gctattttaacaatgataggaatattagatgctagaccaaaagttggctatgtttattgt
gaaggaaataaaacaaatattttatatgaagaaattatgaactcaaaggttttagatata
atgtcaaaaccaataactgtaaatgaggaaactatggtttatgatgctatagtacattta
tttctaaatgatgtgggtacaatgtttgttgaaaataagggtgttttagttggagctgtt
tctagaaaagattttttgaaaatagcaataggtggaacagacatatataaggtaccagtt
ggcataataatgactagaatgccaaatataatatatgcactagaggatgaaacggcttat
aatgttgcaaaaagaattatagagcatgagatagattccgttccagtagttagaaagctt
aaagatgatcttggtaaagagaaattattaatagttggtaagatttcaaaaactaacata
acaagattatttgtgaatctaggaaattattag
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