Candidatus Sarcina troglodytae: HH195_08295
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Entry
HH195_08295 CDS
T06935
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj03030
DNA replication
sarj03430
Mismatch repair
sarj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH195_08295 (holA)
03430 Mismatch repair
HH195_08295 (holA)
03440 Homologous recombination
HH195_08295 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sarj03032
]
HH195_08295 (holA)
03400 DNA repair and recombination proteins [BR:
sarj03400
]
HH195_08295 (holA)
Enzymes [BR:
sarj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH195_08295 (holA)
DNA replication proteins [BR:
sarj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HH195_08295 (holA)
DNA repair and recombination proteins [BR:
sarj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HH195_08295 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QPJ85928
LinkDB
All DBs
Position
complement(1819109..1820152)
Genome browser
AA seq
347 aa
AA seq
DB search
MIDLGTLNKNIKEKKESNCYILCGLDEMLMKETIDKLSKNFVDDGLENLNISKFYGDDLS
AEKLKDAFETFPFMGEKRVVIIYRIQFLNEKLDNDNKKIYEEIKEYLKNTPKQCVIIGYI
LLRDKREKISKLKKLMALDKYITIVNIEKLRGAALYNRVYEKFTSKGVKIGRIQLRYFCD
MVDNNMDIIEREIDKLLNYTHGREITKDDIEALLPRKGEQDIFDLVEFISVKKVDRAVDL
INDLINRGESPIVILSQIREQFQKLYRVKIKISKGYKIEDIKEEFLMVSRVNLPNFVVEK
MITQSKKFNEEQLARCIKLCANTEKILKSTNVNAKSELEIMIIKTVM
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttagggactttgaataaaaatataaaagaaaaaaaagagagtaattgttat
atattatgtggattagatgaaatgcttatgaaggaaacgatagataagctgagtaaaaat
ttcgttgatgatggactagaaaatttaaatataagtaaattttatggtgatgatttaagt
gcagagaaattaaaagatgcgtttgaaacatttccttttatgggagaaaaaagagtagtt
atcatatatcgaatacagtttttaaatgaaaaattagataatgataataaaaaaatatat
gaggaaattaaagagtatttaaaaaatactccaaagcaatgtgtaataataggatatatt
cttctgagagataagagagaaaagattagcaaattaaaaaaacttatggctttagataaa
tatataacaattgtaaatatagagaagttaagaggggctgcactttataatagggtatat
gaaaaatttacttcaaaaggagtaaaaattggacgaatacagttgaggtacttttgtgat
atggtagacaataatatggatatcatagaaagagaaattgataaacttttaaactataca
catggcagagagataacaaaagatgatatagaggctcttcttcctagaaaaggagaacaa
gatatttttgatttagtagaatttatatcggtaaaaaaagtggatagagcggtagatctt
ataaatgatttaataaataggggagaaagtccaatagttattttaagtcaaataagagag
caatttcaaaaactttatagagttaaaataaaaatttcaaaaggatataaaatagaggat
ataaaagaagaatttttaatggttagtagagtaaatttgcctaattttgtagtggaaaaa
atgataactcagagtaagaagtttaatgaagagcagttagcaagatgtataaagctttgt
gcaaatactgaaaaaattttaaaaagtactaatgttaatgcaaaaagtgagttagaaatt
atgataataaaaactgttatgtaa
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