KEGG   Candidatus Sarcina troglodytae: HH195_08405
Entry
HH195_08405       CDS       T06935                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sarj  Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:sarj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sarj03032]
    HH195_08405
   03036 Chromosome and associated proteins [BR:sarj03036]
    HH195_08405
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sarj02048]
    HH195_08405
Enzymes [BR:sarj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HH195_08405
DNA replication proteins [BR:sarj03032]
 Prokaryotic type
  DNA Topoisomerases
   HH195_08405
Chromosome and associated proteins [BR:sarj03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HH195_08405
Prokaryotic defense system [BR:sarj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HH195_08405
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 DUF6104
Other DBs
NCBI-ProteinID: QPJ85949
LinkDB
Position
complement(1847055..1849004)
AA seq 649 aa
MKEEKKFTYDVTDLTSLEKLEPVRVRPGMYIGSTGIKGLHHCIWEILDNAIDEISNGYGD
KAIVILNNDKSVTVIDNGRGIPTGIHPTKKKSGVEMVFTELHTGGKFDNKNYKTSGGLHG
VGAAVVNALSKWLEVCVNQNQKVYRQRFEYALDKELNKVMPGTPVTSLEIIGTSKETGTK
VTFLPDKDVFSSTDFKFEVIDERLQELAFQNKGIHLELIDKRKNEEVKKEYFSERGLLDF
IDYLNESKTPIHETPISFEGERTLGDVNMYGEVCIQFTDSTTENIASYVNNIPTTEAGTH
EAGFKTGMTRAFKEWGKKLNIIKEKDKEFEGDDLREGMTAIVRIKLTNPVFEGQTKTKLG
NNEAYTMMNDLSYSKFCEWIEDNKQVATMIINNALDAASRREKIKKINEAEKKKIGKGTA
PLAGKVAVCTLKNKDFMEFIVVEGDSAGGSAKQARDRRFQTIMPSKGKIMNTEKQKIENV
LASEELRIFNTAIGTGTLDNYKEEDLKYNKIIIMSDADVDGFHIRTLWMTYIYRYMRPLI
ANGHLYLAQPPLYKVYKSSKGMDKVVYAYSDEELESAKKELGKGALIQRFKGLGEMNPDQ
LWETTLNPETRTLIQVTIDDAAKAEKMVSLLMGDIVEPRKNYMYKYAEF
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgaaagaagaaaaaaaatttacttatgatgttacggatttgacatctctagaaaaatta
gaacctgttagagttagacctggtatgtacataggttcaacaggtataaagggtctgcat
cattgtatatgggaaatattagataatgcgatagatgaaatatctaatggatatggagat
aaagctatagtaattttaaataacgataaaagtgtaactgttattgacaatggacggggt
attccaactggtatacatcctacaaagaaaaaatcaggcgttgaaatggtgtttacagaa
cttcatacaggtggaaagtttgacaataagaattataaaacatcaggaggactccatgga
gtaggtgcggctgttgttaatgcactttcaaaatggttggaagtttgtgtaaatcaaaat
caaaaagtatatagacaaagatttgagtatgcactagataaagaattaaataaagttatg
ccagggactcctgtaacttctcttgagattataggaacttcaaaggaaactggaaccaaa
gtaacatttctaccagataaagatgttttttcatctacggattttaaatttgaagttatt
gatgaaagattacaagaattagcgtttcaaaataaaggaatacatttagaacttatagat
aaaagaaaaaatgaagaggtgaaaaaagaatacttctctgaaagaggattattagatttt
atagattatttaaatgaaagtaaaactcctatacatgaaacaccgatatcttttgaaggg
gaaagaactttaggggatgtaaatatgtatggagaagtatgtatacagtttacagattca
acgacagaaaatatagcaagttatgtaaacaacataccaacaacagaagcagggactcat
gaagcaggatttaaaacaggaatgacaagagcttttaaggagtggggaaaaaagcttaac
ataattaaagaaaaagacaaagaatttgaaggtgatgaccttagagaaggtatgactgcg
atagttagaataaaacttacaaatccagtatttgaaggtcaaacaaaaacaaaacttgga
aataatgaagcatacactatgatgaatgatttatcttatagtaagttttgtgaatggata
gaggataataaacaagttgctactatgataataaataatgcattagatgcagcttcaaga
agagaaaaaattaaaaaaataaatgaagcagaaaaaaagaagataggtaagggaacagca
cctcttgcaggaaaagtagctgtttgtacgcttaaaaataaggattttatggaatttata
gtagttgaaggagatagtgcaggggggtctgcaaagcaagctagagatagaaggttccaa
actataatgccgtcaaagggaaaaattatgaatacagaaaagcaaaagatagaaaatgta
cttgcttcagaagaacttaggatatttaatactgctataggaacaggaactttagataac
tataaagaagaggatttaaaatataataaaataataattatgagtgatgcagatgttgat
ggattccatataagaactctatggatgacatatatatatagatatatgagaccattaata
gcaaatggacatttgtatttagcacaacctcctttatataaggtgtataaatcatctaag
ggtatggataaagtggtttatgcttattcagatgaggaattagagagtgctaaaaaagaa
cttggaaaaggagcgttaattcaaaggtttaaaggacttggagaaatgaatccagatcaa
ttatgggaaacaactttaaatcctgaaactagaacattaattcaagtaactatagatgat
gcagcgaaggctgaaaaaatggtttcacttcttatgggagatatagttgagcctagaaaa
aattatatgtataagtatgctgaattttag

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