Candidatus Sarcina troglodytae: HH195_08665
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Entry
HH195_08665 CDS
T06935
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HH195_08665 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sarj03011
]
HH195_08665 (rpsA)
Ribosome [BR:
sarj03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HH195_08665 (rpsA)
Bacteria
HH195_08665 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
RNA_pol_Rbc25
DUF2110
CsrA
Motif
Other DBs
NCBI-ProteinID:
QPJ86001
LinkDB
All DBs
Position
complement(1898854..1900002)
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AA seq
382 aa
AA seq
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MDKEITMEELMSDFELKNFHKGEIVKGKVVSVKNDEIVVNIGHFADGIIPKNEISNNDEF
DINSLSIDDIIYVMVLSGDDGDGNVLLSKKRADKEKTIENIEKSFEENKLISVKVKEVIK
GGLSCDANGVKVFMPASQCSIRRIENFNTLLGKSLDVKVIEFEKRNNKIVVSRRVVEETL
AKEEKERIWNSIKSGEKRQGVVTKLVKFGAFVDIGGVNGLIHLNDMSWSRVNKPEDVVSV
GDNVEVFVQEVDKSKGRISLSLKDILQNPWDNIKTKYKVNDVLDGVVSKFIKVGAFVEIE
PGVEGFVHISEITDENISKPSDALEIGKKIKVKILDINSDENKIALSIKDAIEKSKEYMQ
YNDENEGFCLGELFKDFKFTNK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
ttggataaagaaataacaatggaagaattaatgagcgactttgaattgaaaaattttcat
aaaggagaaatagtaaaaggtaaagttgttagcgtgaaaaatgatgaaatagtggttaat
ataggtcattttgcagatggaataatacctaaaaatgaaatttccaataatgacgaattt
gatatcaattctctaagtatagatgatattatatatgttatggttttaagtggtgatgat
ggggatggaaatgttttattatcaaaaaagagagctgataaagaaaaaacaatagaaaat
atagaaaaatcatttgaagaaaataaattaataagtgtaaaggtaaaagaagttataaag
ggcggtttatcttgtgatgctaatggtgtaaaagtatttatgccagcttctcagtgtagt
ataagaagaattgaaaattttaatactttgcttggaaagtcattagatgttaaggttata
gagtttgaaaaaagaaataataagattgttgtatcaagaagagttgtggaagagacttta
gctaaagaagagaaagaaagaatatggaatagcataaaatcaggagaaaaaagacagggt
gttgtaactaaacttgttaaatttggagcttttgtagacataggaggagttaatggacta
attcatctaaatgatatgtcttggtcaagggttaataagccagaagatgttgtaagtgtc
ggagataatgttgaagtttttgttcaagaagttgataaaagcaaaggaagaatttctttg
tctttaaaggatattttacaaaatccttgggataatataaaaactaaatataaggttaat
gatgttttagatggagttgtaagcaaatttataaaagttggtgcatttgtagaaatagag
ccaggtgttgaaggatttgttcatatatcagaaataacagatgaaaatatatcaaaacca
tctgatgctttagaaataggtaaaaagattaaagttaaaatattagatataaatagtgat
gaaaataaaatagccttaagtataaaagatgccatagaaaaatcaaaagaatatatgcaa
tataatgatgaaaatgaaggtttttgtttaggagaattatttaaagattttaaatttacc
aataaataa
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