Candidatus Sarcina troglodytae: HH195_08735
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Entry
HH195_08735 CDS
T06935
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HH195_08735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
S1
HHH_9
HHH_7
YqgF
S1_RRP5
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QPJ86011
LinkDB
All DBs
Position
complement(1911042..1913201)
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AA seq
719 aa
AA seq
DB search
MQSINEILAKELNISEKQVKSVVELLDDGNTVPFIARYRKEKTGGLSDEVLRIFFERLTY
LRGLENKKEDVIRLIKEQGNLTQDLENKIIQCKNLTEVEDIYRPFKPKKRTRAIIATEKG
LKPLAQVILEGTFSGDLNSEASKYISKEKEVLSEEDALKGAMDIISEIISDDANFRKWIR
EFIKEKGSIETIGKSDDRNNYEMYYEYKEPIKSIPSHRILAINRGEKEQVLQVKLNFNDE
RVINYLEENILKNNEVTDEYLKKSVRDSFKRLIYPSIEREIRSELTSRGEESAIGIFKAN
LKSLLMQAPIKGKVVIGFDPGFRTGCKIAVLDDTGKFIENATVYPTMPKNDIDGSIRILK
ELIYKHDVDVISLGNGTASRESEDVIERLIKEVKEEKGKDLYYVIVSEAGASVYSASELA
NKEYPNLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVGSKKLDESLKGVVED
CVNNVGVDLNIATPSLLSYIAGINGTIAKNIVDFREENGKFTNRKELLKVKRLGKKVYEQ
CAGFLRVSESDEVLDNTSVHPESYEVAKKLIEILGYDKRDLKLGKLKDIDEKIKIIGINK
LADELSVGILTLKDIIKELKKAGRDPREELPKPILKSGVINIKDLKKDMLLMGTVRNVSD
FGAFIDIGVHQDGLVHKSQMANKFVKHPLDIVKVGDIVRVKILEIDEKRKRISLSMKDV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtataaatgaaattttggctaaagagcttaatatatctgaaaaacaagttaaa
agtgttgtagaattattggatgatggaaatactgtgccttttatagctagatatagaaaa
gaaaaaacaggaggattaagtgatgaggtattaagaatattttttgagagacttacttat
ttaagaggattagaaaataaaaaagaagatgttattaggcttataaaagagcaaggaaat
ttaacgcaagatttagaaaataaaattatacaatgtaaaaatttgacagaggttgaggat
atatatagaccttttaagcctaaaaagagaacaagggctataattgctactgaaaaggga
ttaaagcccctagcacaagttatattggaaggtactttttcaggtgacttaaatagtgaa
gcttctaaatatataagtaaggaaaaagaggttttgtcagaagaggatgctttaaagggg
gctatggatataataagtgaaataatatctgatgatgcaaactttaggaaatggataagg
gagtttataaaagaaaaaggaagcatagaaactattggaaaaagtgatgatagaaataat
tatgagatgtattatgaatataaagagcctataaaatctattccgtctcataggatttta
gctataaacagaggagaaaaagaacaggtacttcaagttaaattaaattttaatgatgaa
agagtaattaattatttagaagaaaatattttaaaaaataatgaagtaactgatgaatat
ttaaaaaaatcggtgagggattcttttaaaaggcttatttatccttcgatagaaagagaa
attagatctgaattgacatctagaggggaagaaagtgcaattggtatatttaaggcgaat
ttaaagtcacttttaatgcaagcacctataaaaggcaaagttgtaattggttttgatcca
gggtttagaacaggatgcaagattgcagttttagatgatacaggaaaatttattgaaaat
gcaacggtgtatccaacaatgcctaaaaatgatatagatggaagtataagaattttaaaa
gagttaatttataaacatgatgtagatgttatatctttaggaaatggaacggcttcaaga
gagtcagaagatgttattgaaaggcttattaaagaggttaaagaggaaaaaggaaaggat
ttatattatgtaattgtatcagaagctggggcatctgtttattcagcatcagaacttgca
aataaggaatatcctaatttagatgttacagttagaggtgcaatatctataggtagaaga
cttcaagatccattagctgaacttgttaaaatagatccaaaagctataggagttggacaa
tatcagcatgatgtaggttccaaaaaattagatgaatccctaaaaggtgtagttgaggat
tgtgttaataacgtgggagtagatttaaatatagccactccatctcttttgagttatata
gctggaataaatggaacaatagctaaaaatatagtggattttagagaagaaaatggaaag
tttacaaatagaaaagaacttttaaaagtaaaaagattaggaaaaaaagtgtatgagcaa
tgcgctggatttttaagagtttcagaaagcgatgaagttttggacaatacatctgttcat
ccagaatcttatgaggttgctaaaaaattaatagaaattttaggatatgataaaagagat
ttgaaacttggaaaattaaaagatattgatgaaaagataaagattattggtattaataaa
ttggctgatgagttgagtgtgggaattcttacgttaaaagatataataaaagaattaaaa
aaagcaggaagagatccaagggaagaacttccaaaacctattttaaaatcaggggttata
aatataaaagatttaaagaaagatatgcttcttatgggaactgtaagaaatgtttcggat
tttggagcttttatagatataggagttcatcaagatggcttagttcataaaagtcaaatg
gcaaataaatttgtaaaacatccattagatatagtaaaggttggagatattgtaagggtc
aaaatattggaaatagatgaaaaaagaaagagaatatcactttctatgaaagatgtttaa
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