Candidatus Sarcina troglodytae: HH195_09185
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Entry
HH195_09185 CDS
T06935
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sarj03009
]
HH195_09185
Enzymes [BR:
sarj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
HH195_09185
Ribosome biogenesis [BR:
sarj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HH195_09185
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3826
HFX_2341_N
Motif
Other DBs
NCBI-ProteinID:
QPJ86072
UniProt:
A0ACD1BFM3
LinkDB
All DBs
Position
complement(1986720..1987448)
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AA seq
242 aa
AA seq
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MERLDKVLSNLGYGTRKELKQIIKKKMVTVNGLLAKDSGIQVNPEKDKIVINGEEIFYRK
YIYLLMNKPQGVVSATFDNRDETVIDLLYAEDQAFQPFPVGRLDKDTVGLLILTNDGELN
HKLISPKNHVDKVYFAQINAPINEKDIKAFKDGITLDDGYKCMSAKLEIINNFEDSSEVK
VTIQEGKFHQVKRMFIARNKRVEYLQRIKFGELELDESLEEGEYREITAEELAKLTSVFN
KN
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattagataaggtattatcaaatttaggatatggaacaagaaaagaattaaaa
caaataataaaaaagaaaatggtgactgtaaatgggctattagcaaaagatagtggcata
caagttaatcctgagaaagataaaatagttataaatggagaagaaatattttatagaaaa
tatatatatttattaatgaataagcctcagggagtagtatctgcaacatttgataataga
gatgaaacagttattgatttgctttatgcagaagatcaggcatttcaaccatttcctgtt
ggaagattagacaaagatacggtagggcttcttattttaactaatgatggggaacttaat
cacaaacttatctctcccaaaaatcatgtagataaagtgtattttgcccaaattaatgca
cctattaacgagaaagatataaaggcttttaaagatggtataactttagatgatgggtat
aagtgtatgagtgcaaaacttgaaataataaataattttgaagactcatcagaggtaaaa
gttacaattcaagaagggaaatttcatcaagtaaaaagaatgtttatagctagaaataaa
agagttgaatatcttcaaagaataaaatttggtgaattagaattagatgaaagtttagaa
gaaggggaatacagagagataactgcagaagaacttgcaaaattaacaagtgtttttaac
aaaaattaa
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