Candidatus Sarcina troglodytae: HH195_09585
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Entry
HH195_09585 CDS
T06935
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_09585 (truA)
Enzymes [BR:
sarj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HH195_09585 (truA)
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH195_09585 (truA)
Prokaryotic type
HH195_09585 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QPJ86138
LinkDB
All DBs
Position
complement(2071653..2072387)
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AA seq
244 aa
AA seq
DB search
MRNIKLTIEYDGTRYYGWQRQPIGNTIQQELEKAISKVIKEYVEVIGSSRTDSGVHAKGY
VANFKTNVKMPAEKFRDAINCKLPRDIVIIKSEEVDLDFHARYSSKGKTYCYTILNREYP
CAIDKDYVYYYRWKLNVEEMKKACKYFLGTHDFKAFQTPGGSVKTSIRTISDLHIETNVN
NIKIYISADGFLYNMVRIIVGTLILVGSNKIKEDFVKNIIESGVRQNAGKCAPANGLCLE
KVFY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatataaagcttacaatagagtatgatggaacaaggtactatggatggcaaaga
caacctataggaaatacaattcaacaagaattagagaaagctatatctaaagtaatcaag
gagtatgtagaagtcataggaagtagcagaactgattctggtgttcatgctaaaggatat
gtagctaattttaaaacaaatgtaaaaatgccagctgaaaagtttagagatgccataaat
tgcaaattacctcgagatatagttataataaaatcagaagaggttgatttagattttcat
gctaggtattctagtaaaggaaaaacgtattgttataccatattaaatagggaatatcca
tgtgctatagataaggattatgtatattattataggtggaagcttaatgttgaggagatg
aaaaaggcgtgtaaatattttttgggaactcacgattttaaagcttttcaaactcctgga
ggctctgttaaaacatcaataagaacaataagtgacttacatatagaaacaaacgtaaat
aatataaaaatatatatatctgcagacggttttttatataatatggtaaggataatagta
ggaacattaattttagttggaagtaataaaataaaagaagattttgtaaaaaatattata
gagtctggagtaagacaaaatgccggaaaatgtgctcctgctaatggactttgcttagag
aaagttttttattaa
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