Candidatus Sarcina troglodytae: HH195_10020
Help
Entry
HH195_10020 CDS
T06935
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH195_10020 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sarj01007
]
HH195_10020 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_10020 (lysS)
Enzymes [BR:
sarj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HH195_10020 (lysS)
Amino acid related enzymes [BR:
sarj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HH195_10020 (lysS)
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HH195_10020 (lysS)
Prokaryotic type
Other AARSs
HH195_10020 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QPJ86210
LinkDB
All DBs
Position
complement(2141944..2143452)
Genome browser
AA seq
502 aa
AA seq
DB search
MSNEDINIHQEDKLSEQEILRRQKLKDLQDAGKDPFDVYKVERTHSSAQIVKGFEELEGK
EVKVAGRLMSKRGQGKVLFSDIHDRDGKLQLFVKIDAVGEEALKEFKSLDLGDWIAATGT
VFKTKTGEVSVKVTSFQLICKSLKPLPEKFHGLKDPDLRYRQREVDIITNPEVKTTFLKR
AQIIKGIRNFLDNKGYIEVDTPILGSIAGGAAARPFITHHNTLDIDMYLRIATELHLKRC
IVAGFEKVYEMGRIFRNEGMSVRHNPEFTSIELYEAYADYNDMMELTENMVAEVCTLVNG
TTKVTYEGTEIDFKPPWRRLTMVDAVKEFAGVDFNSISSDEEAQEIAKKHNLEFPKELQY
VSKGEVLNALFEEFGESKLIQPTFIIDYPSENSPLTKKKRGNADFTERFEGFVYGRELCN
AYSELNDPIVQRERFEQQAKQRDLGDDEAYVIDEEFMSALETGMPPTGGLGIGIDRLIMF
LTDSSSIKDVILFPTMKPQENN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaagatataaatattcaccaagaagataaacttagtgaacaagaaatatta
agaagacaaaaacttaaggatttacaagatgcgggaaaggatccttttgacgtgtataag
gttgaaaggactcattcttcagcacaaatagtaaaaggatttgaagaattagaaggtaaa
gaagttaaagtagccggaagattaatgtctaagagagggcaaggaaaagtattgttttct
gacattcatgatagggatggaaaacttcaattatttgtaaaaatagatgctgttggtgaa
gaagctttaaaagaatttaaaagcttagatcttggagattggattgcagcaacaggaaca
gtttttaaaacaaaaacaggagaagtatctgttaaggttacttcattccaattaatctgt
aaatcattaaagccattaccagaaaaattccatggattaaaagacccagatttaagatat
agacaaagagaagttgatataataactaatccagaagtaaaaacaactttcttaaagagg
gctcaaataataaaagggattagaaatttcttagacaacaaaggatatatagaagttgat
actccaattttaggatctattgcaggaggagcagcagcgagaccgtttataactcatcat
aatacgttagatatagatatgtatttaagaatagcaacagaattacatttaaagagatgt
atagttgctggttttgaaaaagtttatgaaatgggaagaatatttagaaatgaaggaatg
tcagttagacataatccagagtttacatctatagaattatatgaagcttatgcagattat
aatgacatgatggaacttactgaaaacatggtggcagaagtttgtacattggttaacgga
acaactaaggttacatatgaaggaacagaaatagactttaaaccaccttggagaagatta
acaatggttgatgctgttaaagaatttgcaggggttgattttaattcaatatcatcagat
gaagaagctcaagaaatagctaaaaagcataatttggaattccctaaagaattacaatat
gtaagtaaaggtgaagttttaaatgctttattcgaagagtttggagaatcaaaattaatt
caacctacatttataatagattatccatcagaaaattcacctcttactaaaaagaaaaga
ggaaatgcagatttcactgaaagatttgaaggttttgtttacggtagagaattgtgtaat
gcatattcagaacttaacgatcctatagttcaaagagaaagatttgaacaacaagcaaaa
caaagagatttaggcgatgatgaggcgtatgttatagatgaagagtttatgagtgcgtta
gaaactggtatgcctccaacaggtggtttaggaataggtatagatagattaattatgttc
ttaacagattcatcatcaattaaagatgttatattatttccaacaatgaaacctcaagaa
aataattaa
DBGET
integrated database retrieval system
