Candidatus Sarcina troglodytae: HH195_11380
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Entry
HH195_11380 CDS
T06935
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarj03016
]
HH195_11380 (mnmE)
Transfer RNA biogenesis [BR:
sarj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HH195_11380 (mnmE)
Prokaryotic type
Methyltransferases
HH195_11380 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
Dynamin_N
RsgA_GTPase
Ras
MMR_HSR1_Xtn
GTP_EFTU
Roc
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QPJ86458
LinkDB
All DBs
Position
complement(2432218..2433591)
Genome browser
AA seq
457 aa
AA seq
DB search
MKEFDTISAIATAIGEGGISIIRVSGGKALEVVNKIFKGKNINDIYDMKPYTMKYGNIVS
NNEIIDEVIISYFKGPKSFTAEDTVEINCHGGVIATNRILQETIKAGARLAEPGEFTKRA
FLNGRIDLSQAEAVMDIITAKTELSMKSAMAQSQGVLSKEINRLREQALNALTLIEYAVD
FTEDDEEPDEQIPINVKKQVEDLIIEIENLLSTADEGKIIKDGLSMVIVGKPNVGKSSLL
NVLLRQKRAIVTEIAGTTRDVIEEYINLDGVPIRIVDTAGIRETEDVVEKIGVEKSKEKI
NEADLIVFMLDTSRELDEEDKEIINYIKNKKHIVILNKIDLDRKLDLKFVDSLNNIIEIS
AKTGFGIEELKNKIINMFFNGEIDTESVIITNTRHKQALYRAVENLNLALEGLKNGEFLD
LVSIYVTSSLRALGEITGNELEEDLVNKIFAEFCCGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagtttgatacaatttctgcaatagctacggcaattggagaaggtgggatttcg
attataagagtatcaggtggcaaagctctagaagtagttaataaaatttttaaaggaaaa
aatattaatgatatttatgatatgaagccttatacgatgaaatatgggaatatagtttct
aataatgagattatagatgaggttattataagttattttaaaggacctaaaagttttacg
gcagaagatactgttgaaataaattgtcatgggggagttattgccacaaatagaatactt
caagaaactataaaggcaggagctagacttgccgagcctggtgaatttacaaaaagagct
tttttaaatggtagaattgatttaagtcaagctgaagcagttatggatattattactgca
aaaacagaactttctatgaagtctgcaatggctcaaagtcaaggggttttatcaaaagaa
ataaatagattaagagaacaggctttaaatgctttaactttaattgaatatgctgtggat
tttactgaggatgatgaagaaccagatgaacaaataccaattaatgtaaaaaaacaagtt
gaagatttaattattgaaatagaaaatttattaagtacggcagatgaaggtaaaataata
aaagatggacttagtatggttatagttggaaaaccaaacgtgggaaaatcatcattatta
aatgttcttttaaggcagaagagagcgatagttactgaaatagcaggaacaacaagagat
gttatagaggaatatataaatttagatggagtgcctatcagaattgttgatacagctgga
ataagagagacggaagatgtagtagaaaaaataggtgtagaaaaatctaaggaaaaaata
aatgaagccgatttaatagtgtttatgttagatactagcagagaactagatgaagaggat
aaggagataataaattatataaaaaataaaaaacatatagttatattaaacaaaattgat
ttagatagaaaattggatttaaagtttgttgatagtttaaataatataatagaaatttca
gcaaagactggatttggaatagaggaattgaagaataaaataataaatatgttctttaat
ggtgagatagatactgaaagtgttataattactaatacaagacataaacaagcactttat
agagcagtagaaaatttaaacttagcattagaaggattaaaaaatggagaatttttagat
ttagtatcaatatatgtaacatcttctttgagagctttaggggaaataactggaaatgaa
cttgaagaagatttagttaataagatattcgctgagttttgttgtggaaaatag
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