Candidatus Sarcina troglodytae: HH195_11610
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Entry
HH195_11610 CDS
T06935
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
sarj
Candidatus Sarcina troglodytae
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Gene cluster
GFIT
Motif
Pfam:
LysM
SH3_3
LysM3_LYK4_5
SH3_4
LysM1_NFP_LYK
LysM_RLK
PSA_CBD
LiaI-LiaF-like_TM1
Motif
Other DBs
NCBI-ProteinID:
QPJ86607
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Position
p1:complement(32885..34771)
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AA seq
628 aa
AA seq
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MKRNKIVSILEYSARNKMLAGILAVSLIGAGGVFLSNNTNFINNTVGINKVVLAQTSHSS
TILYTVQTGNTLSGIAYKYGVTVSQLQQWNNISNPNLIYTGQVLKIYQMSEGQASGKNRT
SSSSNSSYTTYTVQAGNTLSGIAYRYGVTVSQLQQWNNIPNPNQIYVGQILNIYTNTSNS
TNNSLSNTTKSNNNSSNKHSNSSYTAYTVQAGNTLSGIAYKYGVTISQLQQWNNIPNPNQ
IYVGQTLKIYINTSNGVGNPSSKITKSTSTTKQVKETSKDKFRSPHVVSNHNGNEPYKIA
RINTNIVNVRERANINSSIICKLNKNAEVEVLGETNGWYKIVDGNDQIGYIYHTYLNVGS
KTYYSPNIGGHVNNMNQGGIPDTKVINSNDSSSVKATSSKDRIISSNSTYSSYFGSWTIN
TNPVETIQDGISNGSSSFPKTIFLNKSEFIYGNQVIKNPVYKIVNKDSSYFLGAEEFCPQ
IFGENGTDNVKVLVIEDSNNTSNNYSFIIYNNKLLTSNGEYFYGYTLSNSSTTGIIGSTK
NVECNQPENSSSTINKTGTAYIYQPTGDELAGIYEGASGNTTLETALKSGTKVTVLGSEY
GFYKIEYDNNKIGYVPARYLSFNKPQKN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaataaaatcgtgtcaatcttggagtattcagcaaggaataaaatgttagct
ggaattttagcagtttctttaataggagctggaggggtgttcttatcaaataatacaaac
tttattaataacaccgtaggaattaacaaagttgtgttagcgcaaacatctcattcttct
actatattatatacagtacaaaccggaaatacattaagtggaatagcatataaatatgga
gtaacagtttctcaattgcaacaatggaacaatatatctaatccaaatttaatatatact
gggcaagtattaaaaatctatcaaatgtcagaaggtcaagcaagtggaaaaaatcgaaca
agtagttcaagcaattcatcatatactacatatacagtacaagccggaaatacgttaagt
ggtatagcctatagatatggagtgacagtttctcaattgcaacaatggaacaacatacct
aatccaaaccaaatatatgttgggcaaatattaaatatttatactaatacttcaaacagc
acaaataactctttaagtaatacaactaaatctaataataattcaagtaataaacatagc
aattcatcatatactgcatatacagtacaagccggaaatacgttaagtggtatagcctat
aaatatggagtaacaatttctcaattacaacaatggaacaacatacctaatccaaaccaa
atatatgttggacaaacactaaaaatttatattaacacttcaaatggtgtaggtaaccct
tcaagtaaaataactaaatctactagcactacaaagcaagtaaaagaaacttcaaaagat
aaatttcgttcacctcatgtggtatcaaatcataatggaaatgaaccatacaaaatagca
agaataaacacaaatattgttaatgttagagaacgtgctaatataaattcaagcataata
tgtaagttaaataaaaatgcagaagtagaagtattaggagaaactaatggttggtataag
atagttgatggtaatgatcaaatagggtatatatatcatacttatctaaatgtaggaagc
aaaacttattattcacccaatataggtggtcacgttaataatatgaatcaaggtggtata
cctgatacaaaagtaataaattctaatgatagttcatcagttaaggcaacttcatcaaaa
gataggataatatcctctaactcaacatattcatcttattttggaagttggactatcaat
accaatcctgtagaaactatacaagatggaatttctaacggttcaagttcattcccaaaa
acaatattcttaaataaatcagaattcatttatggtaatcaagtaataaaaaatccagta
tacaaaatagtaaataaagattcttcatatttcttaggtgctgaagaattttgtcctcaa
atatttggagagaatgggacagataacgtaaaagtattggtaattgaagattcaaataac
acaagtaataattattcatttataatatataataataagttgcttacatctaatggcgaa
tatttctatggatatacattaagtaattcatctaccacaggaattattggttctacaaaa
aatgtagaatgtaatcaaccagaaaattcaagttcaacaatcaataaaacaggaacagca
tatatatatcaaccaacaggtgacgaattagctggcatttatgaaggggcaagtggaaat
actacactagaaacagcattaaaatcaggaactaaagtaacagttttaggctcagaatat
ggattttataaaatagaatatgataataataaaattggatatgtacctgctcgatattta
tctttcaataaaccacaaaagaactaa
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