Staphylococcus arlettae: SAP2_08680
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Entry
SAP2_08680 CDS
T06808
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sarl
Staphylococcus arlettae
Pathway
sarl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sarl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAP2_08680 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sarl03019
]
SAP2_08680 (cshA)
03009 Ribosome biogenesis [BR:
sarl03009
]
SAP2_08680 (cshA)
Enzymes [BR:
sarl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAP2_08680 (cshA)
Messenger RNA biogenesis [BR:
sarl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAP2_08680 (cshA)
Ribosome biogenesis [BR:
sarl03009
]
Prokaryotic type
rRNA helicases
SAP2_08680 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
UBA
UBQLN1
Flavi_DEAD
Cas3-like_C_2
AAA_19
INTS5_N
Motif
Other DBs
NCBI-ProteinID:
BBK27684
LinkDB
All DBs
Position
900312..901823
Genome browser
AA seq
503 aa
AA seq
DB search
MQNFKELGVSEKTVETLEAMGFSEATPIQKDSIPFALAGKDVLGQAQTGTGKTGAFGIPL
IEKVVGREGVQALILAPTRELAMQVAEQLKAFSKNQKVQVVTVFGGMPIDRQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTADIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTML
FSATMPKAIQTLVQQFMNNPEIVKTMNDKTSNPQIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLTKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEQANN
RQMNALRPPHRKEVLKARENDIKEKVQNWMAKENEPRLQRISTELLEEYNDVELVASLLQ
ELVEANDEVEVQLTFEKPLARKGRQSKGPRRNNNNNKRGNKFDNKNRRAKGGYNNKKGKK
DRPSDRKDNKKTMKGRTFADHKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactaggggtttcagaaaaaacagtagaaaccttagaagcaatg
gggtttagtgaagctacaccaattcaaaaagatagcatcccttttgcattagctggtaaa
gatgtcctaggtcaggcacagacaggtacaggtaaaacaggtgcatttggtatcccatta
atagaaaaagttgtaggacgtgaaggggtacaagcactaattttagctccaacaagagaa
ttggctatgcaagttgcagaacaacttaaagcatttagtaaaaatcaaaaagtacaagtg
gtaactgtttttggtggtatgccaatagatcgccaaattaaagccttgaaaaaaggacct
caaatcgtggtaggtacacctggacgtgttattgaccatttaaatcgtcgtactttaaaa
acggctgacattcatacattgatattagatgaagctgacgaaatgatgaatatgggattc
attgatgatatgagatttattatggataaaatcccagcagaacaacgtcaaacgatgtta
ttctcagctacaatgcctaaagcaattcaaacattagtacaacaatttatgaataatcca
gaaatcgttaaaacgatgaatgataaaacatcaaatccacaaattgaagaattctataca
atagttaaagaattagaaaaatttgatactttcacgaacttcctagatgtacatcaacca
gaattagcaattgtatttggacgtactaaacgacgtgttgatgagttaacgagtgcttta
ttaactaaagggtataaagctgaaggtttacacggagatataacacaagcaaaacgttta
gaagtattgaagaaatttaaaaacgaccaaattgatattttagtagctactgacgtagca
gcgcgtggtttagatatttctggagtaagtcacgtatacaattttgatatacctcaagat
acagaaagttatacgcacagaattggacgtacaggacgtgctggtaaagagggtattgcg
gtaacattcgtcaatccaattgaaatggattacatccgtcaaattgaacaagcgaacaat
cgtcaaatgaatgcattacgcccacctcatagaaaagaagttttaaaagcgcgtgaaaat
gacattaaagaaaaagttcaaaactggatggctaaagaaaatgagcctagattacaacgt
atctctactgagttacttgaagaatacaatgacgtagaattagttgcatcattattacaa
gaacttgttgaagcaaatgatgaagtagaagtacaattgacatttgaaaaaccattagca
cgaaaaggtagacaatcaaaaggtccacgcagaaataataacaacaacaaacgtggcaat
aaatttgataacaaaaaccgtcgtgccaaaggtggttacaataacaaaaaaggaaagaag
gatagaccttctgaccgtaaagacaataagaaaacaatgaaaggtcgcacattcgcagac
cataaaaaataa
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