Staphylococcus arlettae: SAP2_13600
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Entry
SAP2_13600 CDS
T06808
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sarl
Staphylococcus arlettae
Pathway
sarl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sarl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAP2_13600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sarl03019
]
SAP2_13600
03400 DNA repair and recombination proteins [BR:
sarl03400
]
SAP2_13600
Enzymes [BR:
sarl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAP2_13600
Messenger RNA biogenesis [BR:
sarl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAP2_13600
DNA repair and recombination proteins [BR:
sarl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAP2_13600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
DAGK_cat
Motif
Other DBs
NCBI-ProteinID:
BBK28176
LinkDB
All DBs
Position
1417726..1419105
Genome browser
AA seq
459 aa
AA seq
DB search
MLHKALKTWFGFDHFNEGQEEIITSVLKNQPTLGILPTGSGKSLCYQLPTYIKRQPTLIV
SPLISLMDDQVSQMKAQGESSVSCVHSGMDAEEKRQNIDKLSSSRFIFLSPEFLLQGTNI
KLIKNINLGMIVLDEAHCLSEWGYDFRPHYALIRKVTKYFPQATLLALTATAQPFLIDDL
NDMLETKFHQIKTTMNRNNIMLSHKNFSNDDEKLTWLLPFIENSGPTIIYVSSKKMCATL
AHAIYEHGFLTGIYHGDMSYQERHTVQHQFINNEIPVIVATSAFGMGINKKDIRTIIHYH
LPTSPSNYLQEIGRAGRDGTLSQAISLYQPDDSFLLETLLFTDAISENDIQLFELGELID
MNKHEILTVLNEIYTIQTLKRIFNTVFRRKQLSYYRMLGYINLDQCRRKYLLEFFGESFI
NKPTYCCDIDSEELDLKQLNRKKVKRKMDYLEKLQSLFK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgctacataaggcactaaaaacttggtttggttttgatcattttaatgaaggacaagaa
gagatcattacaagcgttttaaaaaatcaacctacattaggtattttaccaacaggaagt
ggcaaaagtttatgttatcaattgccaacttatatcaaaagacaaccaacacttatcgtt
tcacccttaatatccttaatggatgaccaagtgagtcaaatgaaagcacaaggagaatca
tctgtcagttgtgtacattctgggatggacgctgaagaaaaacgtcaaaacatcgacaag
ttatcatctagtcgctttatctttttaagtcccgaattcttattacaaggtactaatatt
aagctcataaaaaatataaatctcggcatgattgtcttagatgaagcacattgtctatct
gaatggggctatgatttccgacctcattatgcattaattagaaaggtaacaaaatacttt
ccacaagctacattgttagcgttaactgctacagctcaaccttttttaatcgatgattta
aatgatatgttggaaacaaagttccatcaaattaaaacaactatgaatcgaaataatatt
atgttgtctcataaaaattttagtaacgatgacgaaaaattaacatggctattaccgttt
atagaaaattctgggcccacaattatttatgtatcttctaaaaaaatgtgtgccactctt
gcacatgctatatatgaacatggctttttaactggaatatatcatggagatatgtcttac
caagaaaggcatactgttcaacatcaatttattaacaatgaaattccggttattgtagct
acgagcgcttttggtatgggaattaataaaaaagacataagaactattattcattatcat
ttaccaacgagcccctcaaactatttacaagaaataggaagagctggtagagatggtact
ttaagccaagcgattagtttatatcaaccagacgatagtttcttattagaaaccttgttg
tttactgacgccatatcagaaaatgatattcaattatttgaacttggtgaattaattgat
atgaataagcatgaaatattaacagtgttaaatgaaatatatacaatccaaacgcttaaa
cgtatctttaacacagtatttcgacgaaaacagttaagctattatagaatgcttggttat
ataaatcttgatcaatgtcgaagaaaatacttactagaattttttggtgagtcatttatt
aacaagcccacttattgttgcgatatagacagtgaagaattagacctaaaacaattaaat
agaaaaaaagtaaaacgaaaaatggattatttagaaaaattacaaagtttgttcaaataa
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