Staphylococcus arlettae: SAP2_22890
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Entry
SAP2_22890 CDS
T06808
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sarl
Staphylococcus arlettae
Pathway
sarl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sarl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAP2_22890 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sarl03021
]
SAP2_22890 (rpoC)
03400 DNA repair and recombination proteins [BR:
sarl03400
]
SAP2_22890 (rpoC)
Enzymes [BR:
sarl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAP2_22890 (rpoC)
Transcription machinery [BR:
sarl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAP2_22890 (rpoC)
DNA repair and recombination proteins [BR:
sarl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAP2_22890 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BBK29105
LinkDB
All DBs
Position
complement(2361298..2364915)
Genome browser
AA seq
1205 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVNPGPTGLEKKTLLSEAEYREYYDKFPGQFSAKMGAEGIKDLLA
EINLDDELKHLRDELESATGQRLTRAIKRLEVVESFRHSGNNPAWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKE
MALELFKPFIMKELVQREIATNIKNAKSKIERMDDEVWDVLEDVIVEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERADAVNTGTIYNDTNEVLKAYANGYVHLHTRIGVH
AQSFNNPTFTEEQNRKILTTSVGKVIFNEIIPDSFAYINEPSQANLEDKTPDKYFVSATE
LGEGGLQEYFKDQPLVDPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGI
TVGVSDIVVLPDKQDILDEHEELVERITKQFNRGLITEDERYNRVVEIWTDAKDKIQGEL
MQSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETIRHPETDAIIIRPDELITADIAKQITDAGIEEMYIRSAFTCNTRH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITDIEGTVEDIKLAKDRQQEIVIKGNNETRSYLASGTSRLKVEVGQ
AVERGEVLTEGSIEPKNFLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHNFTDANREAFKERKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDNLLGLKENVIIGKLIPAGTGMRRYRDVKYDKAAPEQEIEE
AIITE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattatatgaaaataggacttgcttcacctgaaaaaatc
agatcttggtcttttggtgaagtcaaaaagccagaaacaataaactatcgtacacttaaa
ccagaaaaagatggtcttttctgtgaaagaatttttggacctacaaaagactgggaatgt
agttgtggtaaatacaaacgtgtgcgttataaaggcatggtttgtgacagatgtggtgtg
gaagtaactaaatctaaagtgcgtcgtgaacgcatgggacacattgaattagcagcacca
gtatcacatatttggtatttcaaaggtatcccaagtcgtatgggccttttattagatatg
tcaccaagagcattagaagaagttatttacttcgcgtcttatgtggtagttaacccagga
ccaacaggtttagagaagaaaacattactttctgaagcagaatacagagagtattatgat
aaattcccaggccaatttagcgctaaaatgggtgctgaaggtattaaagatttattagca
gaaataaatttagatgatgaattaaaacacttacgtgatgagcttgaatcagctacaggg
caaagattgactcgtgctattaaacgtttagaagttgttgaatcatttagacattctggt
aataatcctgcttggatgattttagacgtattaccaattattccaccagagatcagacca
atggttcaattagatggtggacgttttgctacaagtgatttaaacgatttatatcgtcgt
gttattaaccgtaataaccgtttaaaacgtttattagacttaggtgctcctggcatcatc
gtacaaaacgaaaaacgtatgttacaagaagcagtagatgctttaattgataatggtcgt
cgtggccgtccagttactggtccaggtaaccgtccattaaaatcattgtcacatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttattaggtaaacgtgttgactattcaggc
cgttctgttattgcagtaggacctagcttgaagatgtaccaatgtggactacctaaagaa
atggcattagaattattcaaaccattcattatgaaagaattagtacaacgtgaaattgca
acgaatattaaaaatgccaaaagtaaaattgaacgcatggacgatgaagtatgggatgtt
ttagaagatgttatcgtagaacacccagtattacttaaccgtgcgcctacacttcacaga
ttaggtatccaagcctttgaaccaacattagttgaaggtcgtgcgattcgtttacatcca
cttgtaacgacggcttataacgctgactttgatggtgaccaaatggctgttcacgtacct
ttatctaaagaagcacaagctgaagcacgtatgttaatgttagctgcacaaaatatctta
aaccctaaagatggtaaaccagttgtaacaccatcacaggatatggtattaggtaactat
tatttaacattagaacgtgcagatgctgtgaatacaggtacaatttacaacgatactaac
gaagtattaaaagcgtatgctaatggttatgtgcacttacacacacgtattggtgtgcac
gcacaatcatttaataatccaacatttacagaagaacaaaatcgtaagatcttgacaaca
tctgtaggtaaagtgatatttaatgagattattcctgattcattcgcctatattaatgaa
ccttcacaagctaatttagaagataaaacaccagataagtactttgtttctgcaactgaa
ctaggtgaaggcggattacaagaatacttcaaagatcaaccacttgttgatccattcaac
aaaaaattcttaggtaatatcattgccgaagtgttcaatcgctttagcatcactgacaca
tcaatgatgcttgatagaatgaaagacttaggatttaagttctcttctaaagcgggtatt
actgttggtgtatctgatattgtggtattaccagacaagcaagatattttagatgaacat
gaagaattagttgaacgtattacaaaacaatttaatcgtggtttaattactgaagatgag
cgttataaccgagtagtcgaaatttggacagacgccaaagataagattcaaggtgaatta
atgcagtcattagataaaacaaaccctatcttcatgatgagtgactctggtgcccgtggt
aacgcatctaactttacacagttagcaggtatgcgtggacttatggctgcgccatccggt
aaaattattgagttaccaattacatcatcattccgtgaaggtctaacagtattagagtac
tttatttctactcacggtgcgcgtaaaggtcttgccgatacagcactgaaaactgccgat
tcaggttaccttactcgtcgtcttgttgatgtggctcaagatgttattgtccgtgaagaa
gattgtggtacagaccgtggtttacttgtttcagacatcaaagaaggtactgaaatgatt
gaaccattcatcgagcgtatcgaaggtcgttattctaaagaaacaattcgtcaccctgaa
acagatgcaattatcatccgtccagacgaattgattactgcagatatcgctaaacaaatt
acagatgctggtattgaagaaatgtatatccgttcagcatttacatgtaatacacgtcat
ggtgtatgtgaaaaatgttacggtaaaaaccttgctacaggtgaaaaagtcgaagttggt
gaagcagttggtacaattgcagcccaatcaatcggtgaacctggtacacagcttacaatg
cgtacattccacacaggtggggtagcaggtagcgatatcactcaaggtcttcctcgtatc
caagaaatctttgaagcgcgtaatccaaaaggacaagcggtaatcactgatatcgaaggt
acagtagaagacattaaactagcgaaagaccgtcaacaagaaattgtcattaaaggtaat
aatgaaactagatcttaccttgcttcaggtacttcaagattgaaagtagaagttggacaa
gcagtagagcgtggagaagtattaactgaaggttcaattgaaccgaaaaacttcttatct
gttgctggcttgaacgcaactgaaagctacttactaaaagaagtacaaaaagtttaccgt
atgcaaggtgttgaaatcgacgataaacacgttgaggttatggtaagacaaatgttacgt
aaagtacgtatcattgaagcaggcgatacgaaactattacctggctcattagtagacatt
cacaactttactgatgctaaccgtgaagcgttcaaagaacgtaaacgtccagcaacagct
aaaccagtattattaggtattacgaaagcatctcttgaaactgaaagcttcttatctgcg
gcttcattccaagaaacaactcgtgtcctaacagatgctgcaattaaaggtaaacgtgat
aacttacttggcttaaaagaaaatgttattatcggtaaattgattccagcaggtacaggt
atgagacgttatagagacgttaaatacgacaaagctgctccggaacaagaaatagaagaa
gctattattactgaataa
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