Streptomyces armeniacus: DVA86_03695
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Entry
DVA86_03695 CDS
T10140
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sarm Streptomyces armeniacus
Pathway
sarm00040
Pentose and glucuronate interconversions
sarm01100
Metabolic pathways
sarm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sarm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DVA86_03695
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVA86_03695
Enzymes [BR:
sarm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DVA86_03695
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
AXK31883
UniProt:
A0A345XJR7
LinkDB
All DBs
Position
859390..860409
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AA seq
339 aa
AA seq
DB search
MHSTGSGHRARARSVRVGVAAVAVGAVIGGLAWSGNAAESTGADSPAASERGAGDGSAAA
AEPVGFGAGTTGGAGGETVTVSGAQEFTEAVQSEGPLTVQVEGAVELDGMTDVAADKTVV
GVGTDGGITGGGLNISGVENVIVQNLTFSGSGDDAVSVDGSTHVWIDHNDLSNAYDGLVD
IKNGSDEITVSWNHLHDHDKSMLLGHSDDNGDADTGKLRVTYDHNWFDGTGQRHPRVRFG
NPVHVLNNYYSDIGSYGVASTTNAGVLVEGNSFENVEDPFHLGEGSSEPGALAAKDNHMV
GSGEGETGGEVAEIPYAYTPDAAADVKSLVTEGAGVGRL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcacaggcagcgggcacagagcgcgcgcgagatccgtacgtgtcggcgtggcg
gccgtggccgtcggcgcggtgatcggcgggctggcctggagcggcaacgccgccgagtcc
accggggccgacagccccgccgcgtccgagcggggcgccggcgacgggtccgcggcagcg
gccgaaccggtcggcttcggcgccggtaccaccggcggcgcgggcggcgagacggtgacg
gtctccggcgcgcaggagttcaccgaggcggtgcagagcgaaggaccgctgaccgtccag
gtcgagggcgccgtcgagctggacgggatgacggacgtggccgcggacaagaccgtcgtg
ggcgtcggcaccgacggcggcatcaccggcggcgggctgaacatcagcggcgtcgagaac
gtcatcgtgcagaacctgacgttcagcgggtcgggcgacgacgccgtcagcgtcgacggc
tccacccacgtgtggatcgaccacaacgacctgtccaacgcgtacgacggcctcgtcgac
atcaagaacggctccgacgagatcaccgtctcctggaaccacctgcacgaccacgacaag
tcgatgctgctcgggcacagcgacgacaacggcgacgccgacaccggcaagctgcgcgtc
acgtacgaccacaactggttcgacggcaccggccagcggcacccgcgggttcgcttcggc
aacccggtgcacgtgctgaacaactactacagcgacatcggttcgtacggcgtcgcctcc
acgacgaacgccggcgtgctcgtcgagggcaactccttcgagaacgtcgaggaccccttc
cacctcggcgagggctcctccgagccgggcgcgctggccgcgaaggacaaccacatggtc
ggctccggcgagggcgagaccggcggtgaggtggcggagatcccgtacgcgtacacgccg
gacgcagcggccgacgtgaagtcgctcgtcaccgagggtgcgggcgtgggcaggctgtga
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