Streptomyces armeniacus: DVA86_07730
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Entry
DVA86_07730 CDS
T10140
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sarm Streptomyces armeniacus
Pathway
sarm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sarm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DVA86_07730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarm03400
]
DVA86_07730
Enzymes [BR:
sarm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DVA86_07730
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DVA86_07730
DNA repair and recombination proteins [BR:
sarm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DVA86_07730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_8
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AXK32556
UniProt:
A0A345XLP0
LinkDB
All DBs
Position
complement(1737996..1738862)
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AA seq
288 aa
AA seq
DB search
MPELPEVEALRAFLAGRLDGRRIARVQPVAISVLKTYEPPLDSLEGRAFTGVSRYGKFLA
LEAGELQLVTHLARAGWLRWQDSLPSTPPRPGKGPLALRLRLAEPEGAGFDLTEAGTQKR
LAVYVVRDPHDVPGIARLGPDPLGDGFSAELFRGLLRGERRRLKGVLRDQRVIAGIGNAY
SDEILHAARMSPFKIADTLSEEQADALYEAVGTTLRDAVERSHGVAAGRLKAEKKSGLRV
HGRTGEACPVCGDTVREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgccggaagtcgaggccctccgcgcgttcctggccggccggctcgacggc
cggcggatcgcgcgcgtacagcccgtggccatcagcgtcctcaagacctacgaaccgccc
ctggactcgctcgaaggacgcgccttcaccggcgtgtcccgttacggcaagttcctcgcc
ctcgaggccggcgaactgcagctcgtgacccatctcgcgcgggccggctggctgcgctgg
caggacagcctgccgtccacgccgccccggcccggcaagggcccgctcgcgctgcggctg
cggctggcggagccggagggcgccgggttcgatctgaccgaggcgggcacgcagaagcgg
ctcgcggtgtatgtcgtacgcgacccgcacgacgtacccggcatcgcgcggctcggcccc
gatccgctcggcgacggcttttcggcggagctgttccgcggcctgctgcgcggcgagcgg
cgccgtctgaagggcgtgctacgggaccagcgggtgatcgccgggatcggcaacgcgtac
tcggacgagatcctgcacgccgcccgcatgtccccgttcaagatcgcggacacgctctcg
gaggagcaggccgacgcgctgtacgaggcggtgggaacgacgctgcgcgatgccgtcgag
cgctcgcacggggtggccgccgggcggctgaaggccgagaagaagagcgggctgcgggtg
cacgggcgtacgggtgaggcgtgtcccgtctgcggggacacggtgcgtgaagtgtcgttc
agcgactcgtcgttgcagtactgcccgacgtgtcagaccgggggcaagccgcttgcggat
cggcgcttgtcgcgcctcctgaagtga
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integrated database retrieval system
