Streptomyces armeniacus: DVA86_12125
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Entry
DVA86_12125 CDS
T10140
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sarm Streptomyces armeniacus
Pathway
sarm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sarm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DVA86_12125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarm03400
]
DVA86_12125
Enzymes [BR:
sarm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DVA86_12125
DNA repair and recombination proteins [BR:
sarm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DVA86_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PhoH
PIF1
NPHP3_N
AAA_16
TraI_hel_assoc_N
UvrD_C
UvrD-helicase
nSTAND3
TrwB_AAD_bind
DEAD
HHH_2
AAA
TXNDC16_3rd
HTH_IclR
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AXK33287
UniProt:
A0A345XNS1
LinkDB
All DBs
Position
2756652..2758880
Genome browser
AA seq
742 aa
AA seq
DB search
MAFELAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGSLLGAQVGESLRMEGRW
GSHPQYGRQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRIAERIVDHFGLDTLDVIEQ
DAQKLIEVPGLGPKRTGKIASAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISV
VKNEPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCFLPEEQ
LISDAVKLLQVDTGLVIECLGELAGEDEGVVRETVPGEDGQPVTAVYLVPFHRAEIALAA
QLRRLLRTDEERIPAFRDVDWDKALGWLAGRTGADLAEEQRQAVRLALTEKVAVLTGGPG
CGKSFTVRSVVELARAKKARVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLEADLVVVDEASMLDLLLANKLIKAVPPGAHLLLVGDVDQLPSVGAGEVLRDLLAK
DGPVPAVRLTRIFRQAQQSGVVTNAHRINSGVPPVTQGLPDFFLFAEDDTEEAGRLTVDV
VARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAVTPTRPGLPEKRFGGRVFRV
GDKVTQIRNNYEKGANGVFNGTVGVVTGLDPDDQRLTVRTDEDEEVPYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKRLVVLVGSHRAIGQAVRTVS
AGRRCTALDHRLSGAAGLATGV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgaactcgcggtgctcgaaggggtccttgagcgcatcacgtatgccaacgag
gagaacggatacaccgtcgcccgcgtcgacaccggccgcggcggcggcgacctgctcacc
gtcgtcggctcgctgctgggcgcgcaggtgggggagtcgctgcggatggagggccgttgg
ggctcccacccgcagtacggcagacagttcacggtggagaactacacgacggtgctgccc
gccaccgtgcagggcatccggcgctatctcggctccgggctgatcaagggcatcggcccg
cgcatcgcagagcgcatcgtcgaccacttcggcctggacaccctcgacgtcatcgagcag
gacgcgcagaagctgatcgaggtgccggggctcggcccgaagcggaccgggaagatcgcg
tcggcctgggaggagcagaaggccatcaaggaggtgatggtcttcctgcagggcgtcggc
gtctccacctccatcgccgtccgcatctacaagaaatacggcgacgcctccatctccgtg
gtgaagaacgagccgtaccggctggcggccgacgtctggggcatcggcttcctcaccgcc
gaccgcatcgcgcaggccgtcggcatcccgcatgacagcccggagcgggtcaaggccgga
ctgcagtacgccctttcgcagtcgacggaccagggccactgcttcctcccggaggagcag
ctgatctccgacgccgtgaagctgctccaggtggacaccgggctggtcatcgagtgcctg
ggcgaactcgcgggcgaggacgagggcgtggtgcgcgagaccgtgccgggcgaggacggg
cagccggtgacggccgtctatctggtgccgttccaccgcgccgagatcgccctcgccgca
cagctgcggcggctgctgcgtacggacgaggagcgcatcccggcgttccgcgacgtcgac
tgggacaaggcgctgggctggctcgccgggcgcaccggcgcggatctcgcggaggagcag
cggcaggcggtcaggctggcgctgacggagaaggtcgcggtgctgaccggcgggccgggc
tgcggcaagtcgttcaccgtacggtcggtggtcgagctggcccgcgcgaagaaggcccgg
gtggtgctggcggcgcccacgggacgggccgcgaagcggctgtcggagctgaccggagcc
gaagcgtccaccgtgcaccggctgctggagctgaagccgggcggcgacgcggcgtacgac
cgggaccggccgctcgaggccgacctggtggtggtggacgaggcctccatgctcgacctg
ctgctggcgaacaagctcatcaaggccgtgccgcccggcgcgcacctgctgctcgtcggc
gacgtcgaccagctgccgtcggtcggcgccggcgaggtgctgcgcgacctgctcgccaag
gacggcccggtgcccgccgtgcggctcacccggatcttccggcaggcgcagcagtcgggc
gtcgtcaccaacgcgcaccgcatcaactccggtgtgccgcccgtcacccagggcctgccg
gacttcttcctgttcgccgaggacgacacggaggaggcggggaggctgaccgtggacgtg
gtggcccgccgcatccccgcgaagttcggcctcgacccgcgccgcgacgtgcaggtgctg
gccccgatgcaccgcggcccggccggcgcgggcaccctcaacgggctgctccagcaggcc
gtcacgcccacgcggcccggcctgccggagaagcggttcggagggcgggtcttccgggta
ggcgacaaggtcacacagatccgcaacaactacgagaagggcgcgaacggcgtcttcaac
ggcaccgtgggtgtcgtcaccgggctcgacccggacgaccagcggctgaccgtgcgcacc
gacgaggacgaggaggtgccgtacgacttcgacgagctggacgagctggcgcatgcctac
gccgtcaccatccaccgctcccagggcagcgagtatccggctgtcgtgatcccggtgacg
accagtgcctggatgatgctgcagcgtaatctcctctacaccgccgtcacccgggccaag
cgcctggtggtgctggtcggctcgcacagagccatcgggcaggcggtgcgcacggtctcg
gcgggacgccgctgcaccgcgctcgaccaccggctgtccggcgccgcggggctcgcgacg
ggagtctga
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