Streptomyces armeniacus: DVA86_27535
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Entry
DVA86_27535 CDS
T10140
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sarm Streptomyces armeniacus
Brite
KEGG Orthology (KO) [BR:
sarm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarm03016
]
DVA86_27535
Enzymes [BR:
sarm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DVA86_27535
Transfer RNA biogenesis [BR:
sarm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DVA86_27535
Prokaryotic type
DVA86_27535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AXK35824
UniProt:
A0A345XW08
LinkDB
All DBs
Position
complement(6308353..6309291)
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AA seq
312 aa
AA seq
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MKRGSPYEPGGLVIVDKPAGYTSHDVVAKLRGIARTKRVGHAGTLDPMATGVLVLGIERA
TKLLGFLALTEKEYVGTVRLGQTTVTDDAEGEITASRDASGVAREGIDAGVAALTGELMQ
VPSKVSAIKIDGKRSYKRARDGDDFEIPARPVTVSSFAVHGVHEERAEDGTPVVDVLVSV
VCSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYGLDTARTLEQLQAERDEGDGLSPL
PLADAASAAFSRWDVDARQAGQLANGVQIAMPALAEGGAPVAAFGPDGRFVALVEPRGGR
AKSLAVFVPPKD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcggcagtccgtacgagcccggcgggctcgtcatcgtcgacaagcccgccggc
tacacctcccacgacgtggtcgcgaagctgcgcggcatcgcccgtacgaagcgggtgggg
cacgccggcacgctcgaccccatggccaccggcgtgctggtgctcgggatcgagcgggcc
acgaagctgctcgggttcctggcgctgacggagaaggagtacgtcggcaccgtacggctc
gggcagaccaccgtgaccgacgacgccgagggcgagatcaccgcctcgcgggacgcctcc
ggcgtggcccgggaggggatcgacgcgggcgtcgcggcgctgaccggcgagctgatgcag
gtgccgtcaaaggtcagcgcgatcaagatcgacggcaagcgctcgtacaaacgcgcccgt
gacggcgacgacttcgagatcccggcgcggccggtgacggtctcctcgttcgcggtgcac
ggagtgcacgaggagcgggcggaggacggcacgcccgtggtcgacgtgctggtgtcggtg
gtgtgctcgtcgggcacgtacatccgggcgctggcacgcgatctgggcgccgggctcggc
gtcggcggacacctcaccgcgctgcggcggacccgtgtgggcccgtacgggctggacacc
gcccgcaccctggagcagctgcaggcggagcgggacgagggcgacgggctctcgccgctg
ccgctggcggacgcggcgtcggcggcgttcagccgctgggacgtggacgcgcggcaggcg
gggcagctggccaacggcgtgcagatcgcgatgcccgcactggcggaaggcggcgctccg
gtggccgcgttcgggcccgacgggcgcttcgtggcgctcgtggagccgcgcggcggacgg
gccaagagcctcgccgtcttcgtaccgcccaaggactga
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