Salmo salar (Atlantic salmon): 100136364
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Entry
100136364 CDS
T04363
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator I
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
sasa04145
Phagocytosis
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100136364
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100136364
09144 Cellular community - eukaryotes
04530 Tight junction
100136364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
100136364
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
100136364
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
100136364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_21
DUF87
AAA_29
RsgA_GTPase
AAA_16
nSTAND_NTPase5
T2SSE
FtsK_SpoIIIE
nSTAND3
MMR_HSR1
AAA_23
NB-ARC
ATP-synt_ab
AAA_30
DO-GTPase2
nSTAND1
MeaB
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
100136364
NCBI-ProteinID:
NP_001117005
UniProt:
A0A1S2WYL3
Q9W750
LinkDB
All DBs
Position
ssa16:8837765..8889830
Genome browser
AA seq
1519 aa
AA seq
DB search
MQKSPVEDANFLSKYFFWWTSPLLRKGFRKKLDLTDVYKAPSFDLADNLSERLEREWDRE
VASAKKKPRLLRALSRCFLWPFVFYGILLYFGEASKTVQPQLLGRIIGSFDPFHAPEREQ
GYYLALGLSLLFIARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSTHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNGFCALAALTLLGIVQAC
LSQKMGPHRQKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMSLTRKI
GSLRYFYSASYFFSAILVIVSAIVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVTKIEEYLCKEEYKVLEYNLTTTEIELVNVTASWDEGIGELFEKIKQENKAN
GQPNGDAGLFFTNLYVTPVLKNISLYLEKGQMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTSWIMPGTIRDNILFGLTYDEFRYTSVIKACQLEEDLALLPEKDKTPL
MEGGVTLSGGQRARIGLARAVYKDADLYLLDSPFTHLDIVTEKEIFERCLCKLLSSKTRI
VVTSKLEHLKRADKILLLHNGVCYFYGSFSELQAKRPDFSSLLLGLEAYDNIKAERRSSI
LTETLRRVSIDESTVFRGPEPIHQSFRQPPPPIICTNNGPQAITIAGGDGLTAAEKRKQS
IILNPLAPARKFSFIGMGPQKAQAPPPGSTTIEDAVRELSDRKFSVVPEDDQVEESLPRG
NQYHHGLQHLSGQRRQSVLQFITNARGEGRREQLQTSFRKKLSITPQCELASELDIYARP
LSKDSVYDISEDVDEQDMEQCFADERENVFETTSWNTYLRYIFTNRNLVYVLIFIFLVFA
VEVAGSVLGIFLITDKIWTEEANPSAPNYVDQQHANASSPDVQKPVIVTPTSAYYIIYIY
VATSESVLALGFFRGLPLVHTLLTVSKRLHEQMLTAVLRAPMAVLNTMKTGRIMNRFTKD
MATIDDMLPLALFDLIQLTLIVLGAIFTVSIMRPYIFIAAIPLAVIFVVLRMYFLRTGQQ
LKQLEAEARSPIFSHLIISLKGLWTIRAFGRQSYFETLFHKALNTHTAIWFHYLATLRWF
LFRCDIIFVFFFSAAVFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRS
VDRVFKFIDLPQEEPRPSGGGGKGTDLVIDNPHAQDCWPNQGHMDVQGLTVKYTEAGRSV
LQDLSFTVEGGQSVGVLGRTGSGKSTLLSALLRLASTDGEISIDGVSWNSVTLQTWRKAF
GVVPQKIFILTGTFRMNLDPHARYSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGYVL
SNGHKQLMCLARSILSKARILLLDEPSAFLDPITLQVLRKTLKQSFSNCTVILSEHRVEP
LLECQSFLMIEGSSMKRYDSIQKLLNETSHLKQAMSAAERLKLFPLHRLNSSKRPPQSQQ
PKITALREVAEDEVQNTHL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcacccgtggaagatgcaaacttcctctccaaatatttcttctggtggaca
tctccactgttgaggaagggcttcagaaagaagttggatttgacagatgtttataaagca
ccgtcgtttgatctcgcagacaatctttctgaacgacttgaaagagaatgggaccgagaa
gtggcatcggccaagaagaagcctcggctcctgcgggcgctctcccgttgtttcctctgg
ccttttgtgttctacggaatcctgctgtactttggggaggcgtcgaagacagtgcagccc
cagctcctgggtcgtatcattggctcattcgacccatttcatgccccggagcgggagcag
ggctactacttggccctgggtctcagtcttctcttcattgctcggttcctgctcctgcag
ccagccatcttcggactgcaccacctgggcatgcagatacgcatcgctctcttcagcctc
atctataagaagactctgaagctgtccagccgggtcctggacaagatcagcacaggtcag
ctggtcagcctgatgtcaacccacctcaacaagctggatgagagccttggcctggcccac
tttgtgtggatcacccctctgcagtgtatcctgtgtgtgggtttgatctgggagctgata
gaggtgaatggtttctgtgccctggctgccctcaccctgctgggcattgtacaggcctgc
ctctcgcagaagatggggcctcacaggcagaaaagagcagggatgatcagtcgtcgcctg
gctctgacctcagagatcgtagagaacatccactcagtgaaggcctacggctgggaggag
gtgatggagactatcatcaagaacatcagacaggatgagatgtcattgacgaggaagatt
ggctctctgcgttacttctacagtgcctcctacttcttctctgccatcctggtcattgtg
tcagccattgtgccacacgccctcagcaagggcattatcctgaggcggatcttcaccact
gcctcctactgcatggtgctccgtatgaccctcactagacagctgcccggctccatacag
atgtggtacgacacgctggcgctggtcacaaagatagaggagtacctctgcaaagaggag
tacaaagtattggagtacaacctgaccacaactgagatagagttggtgaacgtgaccgcc
tcctgggatgaaggtatcggggagctctttgagaaaattaagcaggagaacaaggctaac
ggccagcctaacggtgacgcagggttgttcttcacaaacctgtatgtcacacccgtcctc
aagaacatcagcctgtacctggagaagggacagatgctggccgtggctggatccacaggc
tctgggaagagttccctgctgatgatgatcctgggggagctggtcccgtcggaggggaag
atcagacacagtgggcggatctccttctccccccagacctcctggatcatgcccggaacc
atccgtgacaacatcctgtttggtctgacctacgacgagttccgctacacctctgtcatc
aaggcctgtcagctggaggaggatctggccctgctgccggagaaagacaagacgcccctt
atggagggaggggtgaccctaagtggaggtcaaagggcaaggataggcctggccagagct
gtgtataaagacgccgacctctacctactggattcaccttttacccacctggacattgtg
actgagaaagagatctttgagaggtgtctgtgtaaacttttgtcctccaaaactcgtatc
gtggtcactagtaagctggagcacctgaagagagcggacaagatccttctgcttcacaac
ggagtgtgttacttctacggctccttctccgagctacaggccaagagaccagacttcagc
tccctgctcctgggcctggaggcctacgacaacatcaaagccgaacgccgcagctccatc
ctcaccgagaccctccgacgcgtctctatcgatgaatccaccgtcttccgtggccccgag
cccatccaccagtccttccgccagcccccgccaccgatcatctgtacaaacaacggccct
caagccatcaccattgccgggggcgacggtctcacagcagcggaaaaacgtaaacagtca
attatccttaatccgttagcgccggcccgtaaattctccttcatcggtatggggccccag
aaagcccaggctcctccacccgggtccaccactatcgaggatgccgtgcgagagctgtca
gacaggaagttctcagtggtgcccgaggacgatcaggttgaagagtcgctgccgcggggg
aaccagtaccatcatggcctgcagcacctgagcgggcagcgccgccagtccgtgctgcag
ttcatcaccaacgcccggggggagggcaggagggagcagctccagacgtccttcaggaag
aagctgtccatcacgccgcagtgcgagctggcctctgagctggacatctacgcacgaccc
ctgtccaaagatagtgtctatgacatcagcgaggatgtggacgagcaggacatggagcaa
tgctttgcagacgagcgcgagaacgtgtttgagacgacgtcgtggaacacctacctgcgt
tacatcttcaccaacaggaacctcgtctacgtcctcatcttcatcttcctcgtcttcgct
gtagaggttgctggctctgtcctggggatatttcttatcacagataagatctggacagag
gaggccaacccgtcggcgcctaactacgtagaccaacaacacgccaacgcctcgtcaccc
gacgtccaaaagccagtcatcgtcacgccgaccagcgcctattacatcatctacatctac
gtggcgacgtcggagagcgttctggcgctggggttcttcagaggcctgccattggtccac
actttactaaccgtgtccaagaggctgcatgaacagatgctgaccgctgtgctcagggcc
cccatggccgtcctcaacacaatgaagactggtcggatcatgaacaggttcactaaagac
atggccaccatcgacgacatgcttccccttgcactgtttgacctcatccagttaactctg
atcgtgctgggtgccatatttactgtgtccatcatgaggccgtacatcttcattgccgcg
atcccattggccgtcatattcgtggttctgaggatgtactttctgcgtacgggacagcag
ctcaaacaactggaggctgaggcccgtagccctatattctcccacctcatcatctctctg
aagggtctgtggaccatccgtgcgtttggtcgtcagtcctactttgagacgttgttccac
aaggccctgaacacccacacggccatatggttccactacctcgccacgctgcgatggttc
ctcttccgctgtgacatcatcttcgtcttcttcttctccgccgcagtcttcatcgccgtg
ggaaccaaccaggacaagcctggggagattggcatcatcgtggccttagccatgctcatc
cttgggacgttccaatgggctgtcattaccagcatcactgtggatggactgatgcgatcg
gtagaccgggtcttcaagttcatcgacctgcctcaagaggagcccagacccagcggtgga
ggcggtaaaggaacagacctggtgatcgacaacccccacgcccaagactgctggcccaac
cagggccacatggacgtccaaggactgaccgtcaaatacacagaggctggacgctccgtc
ctgcaggacctctccttcactgtggaaggaggacagagtgtgggtgtgttggggaggacg
ggttcaggaaagagcaccctgctttctgccctcctgcggctggcctctacagacggagag
atctccatcgatggggtctcctggaactctgtcaccctacagacctggaggaaagccttc
ggcgtggtgccacagaaaatcttcatcctgaccggtacattccgtatgaacctggatcca
cacgctcgctacagtgacgaggaactgtggcgggtggctgaggaggtgggtctgaagtcc
gtgatagagcagtttccagacaagctggacttccagctggaggacgggggttacgtcctg
agtaacggacacaagcagctcatgtgtctggcccgctccatcctcagcaaggcccgcata
ctgctactggacgaacccagcgcattcctcgaccccataacgttgcaggtcctgaggaag
acgctgaaacagtcgttctccaactgtacagtcatactgtcagaacacagagtggaacca
ctgctggagtgccagtccttcctgatgatcgagggcagttctatgaagaggtatgactcc
attcagaagctgttgaatgagaccagccacctgaagcaggccatgagtgctgctgagcgc
ctcaaactcttccccctgcaccgcctcaactccagcaagcgaccccctcaatcccagcag
cccaagatcaccgccctgcgggaggtggctgaggacgaggtccagaacacgcatctttaa
DBGET
integrated database retrieval system
