Salmo salar (Atlantic salmon): 100136366
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Entry
100136366 CDS
T04363
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator II
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100136366
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100136366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
100136366
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
100136366
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
100136366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_21
DUF87
AAA_29
AAA_16
RsgA_GTPase
T2SSE
FtsK_SpoIIIE
nSTAND3
MMR_HSR1
AAA_23
nSTAND1
NB-ARC
Dynamin_N
ATP-synt_ab
MeaB
DO-GTPase2
AAA_30
Fig1
NTPase_1
Motif
Other DBs
NCBI-GeneID:
100136366
NCBI-ProteinID:
NP_001117006
UniProt:
Q9IAR8
LinkDB
All DBs
Position
ssa10:complement(103145208..103219332)
Genome browser
AA seq
1518 aa
AA seq
DB search
MQKSPVEDANFLSQYFFWWTSPLLRKGFRKKLELTDVYKAPYFDLADNLSERLEREWDRE
VASAKKKPRLLRALSRCFLWPFVFYGILLYFGEASKTVQPQLLGRIIGSFDPIHAPEREQ
GYYLALGLCLLFTARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNGFCALAALTLLGIIQAC
LSQKMGPHRQKRAGLISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIVSAIVPHALSKGIILRSIFTTASYLMVLRMTLTRQLPGSIQ
MWYDTLALVTKIEEYLCKEEYKVLEYNLTTTEVELVNVTASWDEGIGELFEKIKQENKSN
GHPNGDVGLFFTNLYVTPVLKNISLYLEKGQMLAVAGSTGSGKSSLLMMILGELVPSEGK
IKHSGRISFSPQTSWIMPGTIRDNILFGLTYDEFRYTSVIKACQLEEDLALLPEKDKTPL
MEGGVTLSGGQRARIGLARAVYKDADLYLLDSPFTHLDIVTEKEIFERCLCKLMSSKTRI
VVTSKMDHLKRADKILLLHNGVCYFYGSFSQLQAKRPDFSSLLLGLEAYDNIKAERRSSI
LTETLRRVSIDESAVLRGPEPIRQSFRQPPPSVINGNTGPQGITIPGGDGLTVVEKRKQS
IILNPLATARKFSFIGTGPQNSQAPTPGSTTIEDGVRELSERKFSVVPEDDQVEESLPRG
NLYHDGLQHLSGQRRQSVLQFITNAQGQGRREQLQTSFRKKLSVTPQCELASELDIYARR
LSKDSVYDISEDVDEEDMEQCFADERENVFETTSWNTYLRYIFTNRNLVYVLIFIFLIFA
LEVAGSVLGIFLITDKIWTEEANPSAPNYVDQQHSNASSPAVQQSVIVTPTSAYYIIYIY
VATSESVLALGFFRGLPLVHTLLTVSKRLHEQMLTAVLRAPMAVLNTMKTGRIMNRFTKD
MATIDDMLPLVLFDLIQLTLIVLGAIFTVSIMRPYIFIAAIPLAVIFLVLRKYFLRTGQQ
LKQLEAEARSPIFSHLIISLKGLWTIRAFGRQCYFETLFHKALNTHTAIWFHYLSTLRWF
LFRCDIIFVFFFSAAAFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRS
VDRVFKFIDLPQEEPRPSGGGKVTDLVLDNPHAQDCWPNQGHMDVQGLTVKYTEAGRSVL
QNLSFTVEAGQSVGVLGRTGSGKSTLLSALLRLASTDGEISIDGVSWNSVTLQTWRKAFG
VVPQKIFILTGTFRMNLDPHACHSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGYVLS
NGHKQLMCLARSILSKARILLLDEPSAYLDPITLQVLRKTLKQSFSNCTVILSEHRVEPL
LECQSFLMIEGSSMKRYDSIQKLLNETSHLKQAISAAERLKLFPLHRLNSSKRPPQSQQP
KITALQEEAEDEVQDTRL
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcacccgtggaagatgcaaacttcctctcccaatatttcttctggtggaca
tctccactgttgaggaagggcttcagaaagaagttggagttgacagatgtttataaagca
ccatattttgatctcgcagacaatctttctgaacgactagaaagagaatgggaccgagaa
gtggcatcggccaagaagaagcctcggctcttgcgggcactatcccgttgtttcctctgg
ccttttgtgttctacggaatcctgctgtactttggggaggcgtcgaaaacagtgcagccc
cagctcctgggtcgaataatcggctcgtttgaccccatccatgcccctgagcgggagcag
ggttactacctagccctgggtctctgtcttctcttcactgctcgcttcctgctcctgcag
ccagccatctttggactgcaccacctgggcatgcagatacgcatcgctctcttcagcctc
atctataagaagactctgaagctgtccagccgggtcctggacaagatcagcacaggtcag
ctggtcagcctgatgtcagcccacctcaacaaactggatgagagtcttggcctggcccac
tttgtgtggatcacccctctgcagtgcatcctgtgtgtggggttgatctgggagctgatt
gaggtgaatggtttctgtgccctggctgccctcaccctgctgggcatcatacaggcctgc
ctctctcagaagatggggcctcacaggcagaaaagagcagggttaatcagcaggcgtctg
gctctgacctcagagatcgtagagaacatccactcagtgaaggcctacggctgggaggag
gtgatggagactatcatcaagaacatcagacaggatgagatgacgctgacgaggaagatt
ggttctctgcggtacttctacagcgcctcctacttcttctctgccatcctggtcattgtg
tcagccatcgtgccccacgccctcagcaagggcatcatcctgagaagtatcttcaccact
gcctcttacctcatggtgctccgaatgaccctcaccagacagctgcccggctccatacag
atgtggtacgacaccctggcgctggtcacaaagatagaggaatacctctgtaaagaggag
tacaaagtattagagtacaacctgaccaccactgaggtagagctggtgaacgtgaccgcc
tcctgggatgagggtatcggggagttgtttgagaagataaagcaggagaacaagtctaac
ggccaccctaacggtgatgtagggctgttcttcaccaacctatatgttacacccgtcctc
aagaacatcagcctgtacctggagaagggacagatgctggccgtggctggatccaccggc
tccggaaagagttccctgctgatgatgatcctgggagagctggtcccgtcagaggggaag
atcaaacacagtgggcggatctccttctccccccagacctcctggatcatgcccggaacc
atccgtgacaacatcctgtttggtctgacctacgacgaattccgctacacctctgtcatc
aaggcatgtcagctggaggaggatctggccttgctgccggagaaagacaagacgcccctt
atggagggaggggtgacccttagtggaggtcagagggcgaggataggtctggccagagcc
gtgtacaaagatgctgacctctacctgttggattcgcctttcacccacctggacattgtg
acggagaaagagatctttgagaggtgtctgtgcaaactgatgtcctccaagactcgtatc
gtggtcaccagtaagatggaccaccttaagagagcagacaagatccttctgcttcacaac
ggagtgtgttacttctacggctccttctcccagctgcaggccaagagaccagacttcagc
tccctgctcctgggcctggaggcctacgacaacatcaaagccgaacgccgcagctccatc
ctcaccgagaccctccgacgcgtctccatcgacgaatccgccgtcctccgtggtcccgag
cccatccgccagtccttccgccagcccccgccttcggtcatcaacggcaacacgggaccc
caaggcatcaccatccccgggggcgacggtctcacagtggtggagaaacgtaaacagtcg
attatcttaaatccattagcaacggcacgtaagttctccttcatcggtactgggccccaa
aacagccaggctccaaccccagggtccactaccatcgaggatggcgtgcgggagctgtca
gagaggaagttctctgtggtgcccgaggatgatcaggtggaagagtcgctgccccggggg
aacctgtaccacgacggtctgcagcacctgagcgggcagcggcgccagtctgtgctgcag
ttcatcaccaacgcccaggggcagggcaggagggagcagctccagacatccttcaggaag
aagctgtccgtcacgccgcagtgcgagctagcctctgagctggacatctacgcacgacgc
ctgtccaaagatagtgtctatgacatcagtgaggatgtggatgaggaggacatggagcaa
tgctttgcagacgagcgtgagaacgtgtttgagacgacgtcgtggaacacctatttgcgt
tacatcttcaccaacaggaacctggtctacgtcctcatcttcatcttcctcatcttcgct
ctcgaggttgctggctctgtcctggggatatttcttatcacagataagatctggacagag
gaggccaacccatcggcgcctaactacgtagaccaacaacattccaacgcctcgtcaccc
gccgtccaacagtcagtcatcgtcacgccaaccagcgcctattacatcatctatatctac
gtggcgacgtcggagagcgttctggcgctggggttcttcagaggcctgccactggtccac
accttactgaccgtgtccaagaggctgcatgaacagatgctcactgctgtgctcagggcc
cccatggctgtactcaacacgatgaaaacaggtcggatcatgaacaggttcactaaagac
atggccaccatcgacgacatgcttcctcttgtactgtttgacctcatccagttaactctg
atcgtgttgggagcaatcttcactgtctccatcatgcggccgtacatcttcatcgccgca
atcccattggccgtcatattcctggtcctgaggaagtacttcctgcgtaccggacaacag
ctcaaacaactagaagctgaggcccgaagccctatcttctctcacctcatcatctctcta
aagggtctgtggaccatccgtgcgtttggacgtcagtgctactttgagacgttgttccac
aaggccctgaacacccacacagccatatggttccactacctctccacgctgcgatggttc
ctcttccgctgtgacatcatcttcgtcttcttcttcagcgccgcagccttcattgctgtg
ggaaccaaccaggacaagccaggggagattggcatcatcgtggccttagccatgcttatc
cttggtacgttccaatgggctgtcatcaccagcatcactgtggatggactgatgcgatcg
gtagatcgggtcttcaagttcatcgacttgccgcaggaggagcctagacccagtggtggt
ggtaaagtcacagacctggtcctcgacaacccccacgcacaagactgctggcccaatcag
ggccacatggatgtccaggggctgactgtcaagtatacagaggccggacgctctgtgctg
cagaacctgtccttcaccgtggaagcaggccaaagtgtgggtgtgttggggaggacgggc
tcagggaagagcaccctgctctctgccctgctgcgcctggcctctacagatggagagatc
tccattgacggggtctcctggaactctgtcacactacagacctggagaaaagccttcgga
gtggtgccacagaaaatcttcatcctgactggaacgttccgtatgaacctggatccgcac
gcttgccacagtgacgaggaactgtggcgggtggctgaggaggtgggtctgaagtcagtg
atagagcagttcccagacaagctggacttccagctggaggacgggggttatgtcctgagt
aacggacacaagcagctcatgtgtttggcccgctccatccttagcaaggcccgcatactg
ctgctggacgaacccagcgcctacctcgaccccataacgttgcaggtcctgaggaagacg
ctgaaacagtctttctccaactgtacagtcatactgtcagaacacagagtggaaccactg
ctggagtgccagtccttcctgatgattgagggcagttctatgaagcggtatgactccatt
cagaagcttttgaacgagaccagccacctgaagcaggccataagtgctgctgagcgcctc
aaactcttccccctgcaccgcctcaactccagcaagcgaccgcctcaatcccagcagccc
aagatcaccgccctgcaagaggaggctgaggacgaggtccaagacacacgtctgtaa
DBGET
integrated database retrieval system
