Salmo salar (Atlantic salmon): 100136415
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Entry
100136415 CDS
T04363
Name
(RefSeq) peroxisome proliferator-activated receptor alpha
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03320
PPAR signaling pathway
sasa04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100136415
03320 PPAR signaling pathway
100136415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100136415
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
100136415
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100136415
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
100136415
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Ortholog
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100136415
NCBI-ProteinID:
NP_001117032
UniProt:
Q2A667
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Position
ssa10:72569414..72629719
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AA seq
464 aa
AA seq
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MASHYRPPSPLEDSVLGSPVCGDFLGGMEELQDISQSIDGDALSSLDVPEYQSQSSNGSE
GSTVLDALTPASSPSSGGYGAAAGLEEFSSTSLNLECRVCADRASGYHYGVHACEGCKGF
FRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQSEKLKLK
AEILTGDREVEDPQQADQKTLARHIYEAYLKNFNMNKAKARTILTGKTSTPPFVIHDMET
LQLAEQTLVAKMVGTAGSHLLEKEAEVRIFHCCQCTSVETVTELTEFAKSVPGFSSLDLN
DQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPKFQFAM
KFNGLELDDSDLALFVAAIICCGDRPGLVNVTHIECMQENIVQVLQLHLLANHPDDTFLF
PNLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccactaccggccgccgtcccccctggaggattcggtgctgggcagcccggtg
tgtggggacttccttgggggcatggaggagctgcaggacatctcccagtccatcgacggt
gacgccctcagctccttggatgtccctgagtaccagtcccagtcgagtaacggctccgaa
ggatccaccgttctagatgctctgaccccagcctccagcccgtcgtcaggggggtatggg
gcggctgcagggctggaggagttctcctccacctctctcaacctggagtgtcgggtgtgt
gccgaccgcgcctccggataccactacggagttcacgcctgtgagggctgcaagggtttc
tttcggcggaccatccgcctgaagctggaatatgacaagtgtgagcgccgctgtaaaata
caaaagaagaaccgtaacaagtgccaatactgccgcttccagaagtgcctgtctgtgggc
atgtcccacaacgcgatccgttttggtcggatgccccagtctgagaagctgaagctgaag
gcagagatcctgacaggtgacagggaggtggaggacccccagcaggccgaccagaagact
ttggccaggcacatctacgaggcctacctcaagaacttcaacatgaacaaggccaaagcc
cgcaccatcctcaccggcaagacaagcactccacccttcgtcatccacgacatggagacc
ctccagctggcagagcagaccctggtggctaagatggtgggcacggccgggagccatctg
cttgagaaggaggctgaggtccgcatcttccactgctgccagtgcacctccgtagagacg
gtcacagagctaaccgagttcgccaagtctgtccccggcttctccagcctggacctgaac
gaccaggtgactctgctgaagtacggcgtctacgaggcactgttcgccctgctggcatcg
tgtatgaacaaggacggcctcctggtggcctacggatcgggcttcatcaccagggagttt
ctcaagagcctgaggaggcccttcagcgacatgatggagcccaagtttcagttcgccatg
aagttcaacgggctggagctggatgacagtgacctggctctgtttgtggctgccatcatc
tgctgtggagaccgccctggcctggtgaacgtgacccacatcgagtgcatgcaggagaac
attgttcaggttctgcagctccacctgctggccaaccacccagacgacaccttcctcttc
cccaatctgctgcagaaactggccgacctccgtcagctggtcaccgagcatgcgcagttg
gtccaggagatcaagaagacagaggacacgtcactccaccccctgctgcaggagatctat
agggacatgtactga
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